| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5166 |
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| Symbol | |
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| ID | 8336520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5934689 |
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| End bp | 5936617 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958264 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115866 |
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| Protein GI | 256394302 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.400775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0878066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGCACG CGTCCCAGTC CGGCGGTCTC CGCCGCCGAA CGTCGATCGT CGCGGCCGCG
GTGGTGCTGT CCGCCGCGGC CGCGATCCCC ACGGCCTTGG CCGCGCAGGC TCCGTCGGCG
GCTGCCGCGG TCGCCAGCCC GACCGCGAGC GCGGTCATCA GCGTCTCGAG CGCCGGTACC
GGTACGGCGC TGACGAATGC CGACGTCGGT CTGTCCTACG AAGCGTCCTT CCTCGCCTTG
CCGGGCTTCG GGCAAGGTAA CCAGTTCCAG TACCTCAAGA CCCTGGGAAC CTCGGTCGTG
CGTATCGGCG GCAACCAGGT CGACCGGAGC TTCTGGACGT CCACCAATGA GGCGCAGCCC
TCGTGGGCGG ACGCCACGAT CACCCCCGCC GATCTGACCG CGCTGGCGAA CCTGGCCACG
AAGAGCGGCT GGAAGGTGAT CCTGGGTGTG ACCATGAAGG AGTACGACCC GGCCCGCGCC
GCCGACGAGG CCAAGCACGC CGCGGCCGCG CTCGGCTCGT CGTTGCAGGA CATCGAGATC
GGCAACGAGC CGGACCTGTA TCCGCAGTAC AGCGGCAACT CCGCGCAGTA CGTCACCGAC
TTCCACGCCT ACGTGCGGGC GATCACCGCC GCGGCGCCCG GGGTGAAGAT CGAGGGCAGC
GACGCCGCGA CGTCGCCGAC CGGCGCGCTG CAGACGGCGT TCGTCAACGA CCAGGCGTCG
ATGGCGAGCC CGCAAATCAG CGAGCTGACG AGCCACCATT ACCCGCTGTC GAACTGTGGC
AGTCCGAACC CGGCGCCGAG CATCGCCGAC CTGCTGTCCT CCTCGACGCA CGCGAAGGAG
ACCTCGGCGG CCGACAGCGC GGTGACGGTC GCGAAGCGGC TGGCGCTGCC GGCGGTCATC
GACGAGGGCA ACTCGGTGGT GTGCAGCGGG ATTCAGGGCG TGTCGGACGT CTACGCCTCG
GCGCTGTGGG CGGTGGACGA GGAGCTGAAC TTCGCGCAGG AGGGTGCGGC CGGGTACTAC
ATGCACGGCA CTGTGACGCA GTGCTACGGC ACGACGAGCT ACCCGTACTA CACGCCGCTG
TGCGCGGCGA CCGCGGCGGA TGCCGCTGCC GGCAACGTGT CCGCGCAGCC GGAGTACTAC
GGGCTGGCAG CGGTGCACGC CGCGGGCACG GGCAACTTCC TGCAGGTCAA CAACCCGTCT
TCGGCGACGG TGCGCGCCTA CGCGATCCAG CATGCTGACA AGTCGGTCAC GGTGGTGCTG
GACAACGTGG CGGATCCGGC GTCCAACGGC GCGACGAGCG TGCAGCTGAA CCTGCCGCAG
ACGTTCGGAT CGGCGTCGCG GTTCGACCTG TCGGCGTCCA GCCTGACCAC CAGGAGCGGG
ATCACGCTCG GCGGCAAGAC GGTGCAGTCC GACGGGACGC TGCCCGCGCC GGCGACGACG
TCGTCCTCGG TCGGCTCGAA CACCTTCTCC GCCTCCGTCC CGGCCGGCGA CACGGCGCTG
ATCACCTTCT CCGCACCGTC CGGCGCGAGC CCGACCACGC TGGTCGGCAG CCCGTCCGGG
AAGTGCCTGT CGGTCACCGG CGGTTCCACC GCGCCCGGGA CGACGTCGGA CATCTACACG
TGCAACGCCA GTGCCGGCGA GAGCTGGCTG GTCAACGCCA ACGGGACGGT CACCGGCGCG
TTCAGCGGTC TGTGTCTGGA GGTGCAGGGA AGCGCGACGG CGGACAAGTC GTATGTGGGT
GTGAACACGT GCACCGGCGC GGCGAACCAG CAGTGGATGG TGCACTCGGC GCCGGGTGCG
GCCGGGACGA TCGTCGGGGC GCAGTCCGAG AAGTGCCTGA GCGTGTTCGG GGCGTCGACG
GCCAACTATG CGCTCGCTGA GATCTACACG TGCAACGGGA GCTCGAGTGA GAACTGGAGC
GAGCACTAG
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| Protein sequence | MRHASQSGGL RRRTSIVAAA VVLSAAAAIP TALAAQAPSA AAAVASPTAS AVISVSSAGT
GTALTNADVG LSYEASFLAL PGFGQGNQFQ YLKTLGTSVV RIGGNQVDRS FWTSTNEAQP
SWADATITPA DLTALANLAT KSGWKVILGV TMKEYDPARA ADEAKHAAAA LGSSLQDIEI
GNEPDLYPQY SGNSAQYVTD FHAYVRAITA AAPGVKIEGS DAATSPTGAL QTAFVNDQAS
MASPQISELT SHHYPLSNCG SPNPAPSIAD LLSSSTHAKE TSAADSAVTV AKRLALPAVI
DEGNSVVCSG IQGVSDVYAS ALWAVDEELN FAQEGAAGYY MHGTVTQCYG TTSYPYYTPL
CAATAADAAA GNVSAQPEYY GLAAVHAAGT GNFLQVNNPS SATVRAYAIQ HADKSVTVVL
DNVADPASNG ATSVQLNLPQ TFGSASRFDL SASSLTTRSG ITLGGKTVQS DGTLPAPATT
SSSVGSNTFS ASVPAGDTAL ITFSAPSGAS PTTLVGSPSG KCLSVTGGST APGTTSDIYT
CNASAGESWL VNANGTVTGA FSGLCLEVQG SATADKSYVG VNTCTGAANQ QWMVHSAPGA
AGTIVGAQSE KCLSVFGAST ANYALAEIYT CNGSSSENWS EH
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