Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5163 |
Symbol | |
ID | 8336517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5931257 |
End bp | 5932225 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958261 |
Product | Beta-lactamase |
Protein accession | YP_003115863 |
Protein GI | 256394299 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0157119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAGAT TCACGGAACG GATCGTTGTC CGCACGGTTT CGGTCGCGGC TTCGCTCGCC TTGGTGGCGG CGGCGCTTGG CGGGTGTTCT TCGGCTTCGA ACGCGCCGAC ATCCTCGGTT CCGTCAGCTT CATCGACATC ATCGACTCCG GCAGCTTCGT CGGCAGCGAG CACGTCCGCA AGCACCGACA CCGATTCGGC GGCGTTCGCG CAGATCGCGG CGCACTATCA GGCGCAGCTC GGCGTCTACG CCGTGGACAC CGGTTCGGGA CGCACGGTCG GGTACCAGGC GGACCAGCGG TTCGCGTTCT GTTCGACGAT CAAGGCTCTG GCCGCCGCCG AGCTCCTGCA CCGTGACACC GATGCGCAAC TCGCCCAGAC CATCCACTAC TCCGCCTCGG ATCTCGTCGA CTACTCCCCC GTCACCTCCC AGCACGTCAA CGACGGCATG ACCCTCACCG CGGTGATGAC GGCGGCGATC GAGGTCAGCG ACAACACCGC GCTGAACCTC ATGCTCGATC GGCTCGGCGG ACCGGCGGGG TTGCAGACGG CATTGCGCGG CATGAATGAC GCGACGACCG ATGCCGACCG TCCCGAGCCG GCGGTCAACT CCGCGGTGCC GGGCGACGTG CGCGACACCA GCACACCCCG TGCCATGGCT GAGGATTTGC GCGCGTATGT ACTTGGCAAC GCGCTGTCCC CGCAGCGGCG TGCGTTGCTG ACCTCGTGGC TGACGGCGAA CACCACCGGC GGCCCGTACA TCAGGGCTGC GGTGCCGGCG GGCTGGACGG TCGGGGACAA GACCGGCAAC GGCGACTACG GCACGCGCAA CGACATCGCC GTCCTGTGGC CGCCGCACCG CGCGCCGATC GTGATCGCAG TGCTCTCCCA TCGCGACGGC AAGGACGCGA CCTCCGCCGA CGCCCTGATC GCCGACGCCA CGAAGGTCGC CCTTCAGCAG CTCGGGTGA
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Protein sequence | MRRFTERIVV RTVSVAASLA LVAAALGGCS SASNAPTSSV PSASSTSSTP AASSAASTSA STDTDSAAFA QIAAHYQAQL GVYAVDTGSG RTVGYQADQR FAFCSTIKAL AAAELLHRDT DAQLAQTIHY SASDLVDYSP VTSQHVNDGM TLTAVMTAAI EVSDNTALNL MLDRLGGPAG LQTALRGMND ATTDADRPEP AVNSAVPGDV RDTSTPRAMA EDLRAYVLGN ALSPQRRALL TSWLTANTTG GPYIRAAVPA GWTVGDKTGN GDYGTRNDIA VLWPPHRAPI VIAVLSHRDG KDATSADALI ADATKVALQQ LG
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