| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5160 |
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| Symbol | |
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| ID | 8336514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5927660 |
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| End bp | 5929219 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958258 |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003115860 |
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| Protein GI | 256394296 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0027116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCCTCG GATCACGCCT GTCGCGTCTG TCCACGTTCA GACGCAAGGT GCTGGCGGCC
GGCGCCGTGC TGGCGCTGAC CTTCGGCATC GCCGTGGAGA CGACCGCGGT TTCGCACGCC
GCCGTCACCG GGCCCTGCGA TATCTACGCC TCGGGCGGTA CGCCGTGCGT CGCCGCGCAT
AGCACCACGC GCGCGCTGTA CGGGTCCTAC AACGGCAGCC TGTACCAAGT GCGGCGCGCC
TCGGACAGTG CCACGGCGAA CATCGGCGTC CTGAGCGCCG GAGGTTATGC CAACGCCGCA
GCGCAGGACT CCTTCTGCGC TAACACGTCC TGCGTCATCA CGGTCATCTA CGACCAGTCC
GGACGCGGCA ACAACCTCAC CGACGCCCCG GCCGGCGGCG CGGCCGGAGG ACCGGACAAC
CTCGCCAACG CCTACGCCGC CCCGACCGTG CTCAACGGGC ACAAGGCCTA CGGCGTCTAC
GTCGCGGCCG GCACGGGCTA CCGCAACGAC CACACCAACG GCATCGCCAC CGGCGACAAC
GCCGAGGGTG AGTACGCCGT CTTCGACGGT ACGCACTACA ACGGCGGCTG CTGCTTCGAC
TACGGCAACG CCGAGACCAA CAACAACGAC GATGGCAACG GCACCATGGA AGCCATCTAC
TTCGGCAACA TCAAGGTCTG GGGATACGGC TCCGGAAACG GTCCGTGGAT CATGGCGGAC
ATGGAGAACG GCCTGTACTC CGGGCAGAAC GCCGGCTACA ACGCCAACGA CCCCACGATC
AACTACCGCT ACACCACCGC CATCATCAAG GGCACCGCCA ACAAGTGGGC GATCCGAGGC
GGTAACGCAC AATCCGGTGG CCTGTCCACC TTCTACAGCG GACCGCGGCC CAACGTCTCG
GGCTACAACC CGATGCGCAA GCAGGGTGCG ATCATCCTCG GCATCGGCGG CGACAACAGC
AAGGGATCGG CGGGAACCTT CTACGAAGGC GTCATGACCT CCGGCTACCC CTCGGACGCC
ACCGAGAACT CGGTCCAGGC CAACATCGTC GCCGCCGGAT ACAGCTCCGG CTCGAGCTCC
GGCGGTCTGA CGCCCGGCTC GCGCATCTCG GTGCGCGCGA CGACCTCATG CTGCACCAGC
GACTACCTCC GCCATGACGA CGCCGACACC AAGGCCGTCA TCTCGGCCAT CTCCTCCAGC
AGCTCGGCGA CCGACAAGGC CGACGCGACG TGGATCGTCC GCGCCGGTCT GGCCGACAGC
TCCTGCGTGT CCTTCGAGTC CGCCAACGAT TCCGGGCAGT TCCTCCGGCA TTACAACTAC
GAGCTCTACA TCGCGGCGAA CGACGGATCC TCGGTGTTCG CCCAGGACGC GACGTTCTGC
CCGAAGGCCG GGAACAGCGG CCAGGGCACG TCGTTCCAAT CGGTGAACTA CAACACCAAG
TACATCCGGC ACTTCAACTA CACCGCCTAC ATCGCCAGCA ACGGCGGCTC GAACGCCTGG
GACAGCACCA CGTCCTGGGC CGACGACACC AGCTGGGTCG TGAGCACTCC GTGGGCCTAA
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| Protein sequence | MALGSRLSRL STFRRKVLAA GAVLALTFGI AVETTAVSHA AVTGPCDIYA SGGTPCVAAH
STTRALYGSY NGSLYQVRRA SDSATANIGV LSAGGYANAA AQDSFCANTS CVITVIYDQS
GRGNNLTDAP AGGAAGGPDN LANAYAAPTV LNGHKAYGVY VAAGTGYRND HTNGIATGDN
AEGEYAVFDG THYNGGCCFD YGNAETNNND DGNGTMEAIY FGNIKVWGYG SGNGPWIMAD
MENGLYSGQN AGYNANDPTI NYRYTTAIIK GTANKWAIRG GNAQSGGLST FYSGPRPNVS
GYNPMRKQGA IILGIGGDNS KGSAGTFYEG VMTSGYPSDA TENSVQANIV AAGYSSGSSS
GGLTPGSRIS VRATTSCCTS DYLRHDDADT KAVISAISSS SSATDKADAT WIVRAGLADS
SCVSFESAND SGQFLRHYNY ELYIAANDGS SVFAQDATFC PKAGNSGQGT SFQSVNYNTK
YIRHFNYTAY IASNGGSNAW DSTTSWADDT SWVVSTPWA
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