| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5156 |
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| Symbol | |
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| ID | 8336510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5921782 |
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| End bp | 5923089 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958254 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003115856 |
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| Protein GI | 256394292 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.18905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00252858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGCACTC AGGCAGGTCG GGGCGGCAGC GAGAGCACGC AGCGCGGACC GGTCGTCACC
GGCGTCGACA TCACCCCGGT CGCGATCGCC GATCCGCCGC TGCTGAACGC CTCCGGCGTG
CACGAGCCGT TCCAGCTGCG CTCGATCATC CAGGTCCGCA CCGACGCCGG CATCACCGGC
GTCTCCGAGG CCTACGGCGA CGACGCCACC CTCGCCCAGC TGCGCCAAGC CGCCGCGACC
CTCCCGGGCC TGGACGTCTT CCACCTCAAC GACCTCACCC GGCGCGTCTC CGGCGCCCTG
GCCTCGGCGT CGGCCTCCTC GCCGACCGAG CTGATCGGTG CCGCCAGCGC GGACAAGACC
GTCGCGCAGG CGGTCTCGGC GTTCGAGGTG GCGTGCTTCG ACATCCAGGG CAAGGCGACC
GGCAAGCCGG TGGTGGACCT GCTCGGCGGC GCGGTGCGCG ACCGCGTCGA CTTCAGCGCC
TACCTGTTCT ACAAGTGGGC TGAGCACCCC GGCGACTACC CCGCCGACGA CTGGGGCGCG
GCGCTGGATC CGGACGGCAT CGTCGCGCAG GCCCGCCGCA TGGTGGAGCT GTACGGCTTC
GGCTCGCTGA AGCTCAAGGG CGGTGTCTTC GCCCCCGAAG AGGAGGTCGC GGCGGTCAAG
GCGCTGCGGG CGGCCTTCCC GGACCGTCCG GTCCGGCTGG ACCCGAACGC GAACTGGTCG
GTGGAGACCA GCCACCGGGT CGCTGCGGCG CTGGAAGGCG AACTCGAATA CCTGGAGGAC
CCGACCGCCG GCATCCCCGG CATGGCCGAG GTCGCGGCGA AGACATCGCT GCCGCTGGCG
ACGAACATGT GCGTGACCGG GTTCGCCGAG ATCCCCGAGG CGGTGCGGCT GGGCGCGGTC
CAGGTGATCC TGTCCGACCA CCACTTCTGG GGCGGGTTCC GGGCGACGCA GGCCTTGGCA
GGGCTCTGCG AGACCTTCGG GCTGGGACTG TCGATGCACT CGAACACGCA CCTGGGCATC
AGCCTCGCCG CGATGACGCA CCTGGCTGCC GCCACGCCGA ACCTGACGTA CGCGCTGGAC
ACGCATTCGC CGTGGAAGAC CGAGGAGGTT ATCGCCGGCG GTCCGCTGCG GTTCGTCGGC
GGCGCGCTGA CGGTGCCCGA GGGTCCGGGT CTGGGCGTCG CCGTCGACGA AGACGCGCTG
GCACGGCTGC ATGAGCAGTA CCTGACCTGC GGATTCCGTA AGCGCGACGA CGCGACGTGG
ATGCGCCGGG TGCAGCCGGA GTTCACCGGA CGGCGGCCGA GGTTCTGA
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| Protein sequence | MSTQAGRGGS ESTQRGPVVT GVDITPVAIA DPPLLNASGV HEPFQLRSII QVRTDAGITG
VSEAYGDDAT LAQLRQAAAT LPGLDVFHLN DLTRRVSGAL ASASASSPTE LIGAASADKT
VAQAVSAFEV ACFDIQGKAT GKPVVDLLGG AVRDRVDFSA YLFYKWAEHP GDYPADDWGA
ALDPDGIVAQ ARRMVELYGF GSLKLKGGVF APEEEVAAVK ALRAAFPDRP VRLDPNANWS
VETSHRVAAA LEGELEYLED PTAGIPGMAE VAAKTSLPLA TNMCVTGFAE IPEAVRLGAV
QVILSDHHFW GGFRATQALA GLCETFGLGL SMHSNTHLGI SLAAMTHLAA ATPNLTYALD
THSPWKTEEV IAGGPLRFVG GALTVPEGPG LGVAVDEDAL ARLHEQYLTC GFRKRDDATW
MRRVQPEFTG RRPRF
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