| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5147 |
|---|
| Symbol | |
|---|
| ID | 8336501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5912763 |
|---|
| End bp | 5913689 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644958245 |
|---|
| Product | domain of unknown function DUF1731 |
|---|
| Protein accession | YP_003115847 |
|---|
| Protein GI | 256394283 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
|---|
| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0703058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.258196 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGTCC TCATCGCCGG ATCGAGCGGG CTGATCGGCG GCGCGCTGAG CTCGGCCTAC
CACCAGGACG GCCATGACGT CGTCCGCCTG GTCCGCCGAC CGACGCAGAA CCCTGACGAA
GTGCGATGGG ACCCGGCGAA GCCCGATCCG CGCCTTCTCG ACGGCGCCGA CGTGGTCATC
AACCTGGCCG GCGCTCCGCT CGGCGACCGG CGATGGAACG CCGGCTACCG CGACCTGATC
GCCGCCAGCC GCATCGGCAC CGCCTCGGCG CTGGCCACGA TGGCGGCGCG CGCCGCGAGA
CCGCCGGCAG TCCTGCTCTC GATGTCCGGG ATCAGGTACT ACGGCGTCGA TCGCGGCGAC
GAGGAGCTCA CCGAGTCCAG CGCCGCCGGC AGCGACGGCT TCCTGCCGCT GGTCACGTCG
CGATGGGAGG CCGCGACCGG TCCGGCTGCC GACGCTGGGG TGCGGGTCTG CCACCTGCGG
ACCGCTCTGG TGCTGTCCGC GGCCGGCGGC TTGGTGCCGC GGCTGCTGAC GCCGTTCCGG
TTCGGCGTGG GCGCGACGCT GGGTTCGGGC CGCGCGTATT GGAGCTTCCT GACATTGCAC
GACACTGTCG CGGCCATTCA GTTTCTGGGG GAAAGCCCGC AGTGCGAGGG TCCCTACAAC
CTCTCGGCGC CGATTCCGGT GCGTGCGAAG GAGTTCACGA AGGCGCTGGC GTCGGCGGTC
GGCAGACCGG CGCGGCTGCG GCTGCCGGTG TGGGCGCTGC GTATCGGGGT CGGGCAGATG
GGCCCGGAGG TGCTGGGCAG TCTGCGGGTC CTGCCGGAGC GGTTGCTGGC AGCCGGATTC
CGTTTCCGGG ACAACGATAT CGAGACTGCG GTACGCCAGG CGCTGGCCGG GCACGGGCAT
GGCCTCACGC GCTCGTCGAG CATGTGA
|
|---|
| Protein sequence | MRVLIAGSSG LIGGALSSAY HQDGHDVVRL VRRPTQNPDE VRWDPAKPDP RLLDGADVVI
NLAGAPLGDR RWNAGYRDLI AASRIGTASA LATMAARAAR PPAVLLSMSG IRYYGVDRGD
EELTESSAAG SDGFLPLVTS RWEAATGPAA DAGVRVCHLR TALVLSAAGG LVPRLLTPFR
FGVGATLGSG RAYWSFLTLH DTVAAIQFLG ESPQCEGPYN LSAPIPVRAK EFTKALASAV
GRPARLRLPV WALRIGVGQM GPEVLGSLRV LPERLLAAGF RFRDNDIETA VRQALAGHGH
GLTRSSSM
|
|---|
| |