| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5142 |
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| Symbol | |
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| ID | 8336496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5900969 |
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| End bp | 5903830 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958240 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003115842 |
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| Protein GI | 256394278 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA TGGTGGGGCG AGGCGAGGAG CTGGCCCGGC TCGCGGCGTT CGTGACAGCC
GGGACGGGCC AAGCCCTGGT GCTGCGCGGG GAAACCGGCG TCGGCAAGAG CGCCCTGGTC
AACCACACGG CGGCGAGCGC CGAGCGCGAG GGGCAGCGCG TCGTGCAGGC AGCCGGTGTC
GAGGCGGAAT CCGAGCTGCC CTACGCAGGT CTTCACCAGC TGCTCTACCC GGTGCTGGCC
GAGCTCGGTC CGTCGCAGGA CGGCGCCTGG CGCCAGCTCG ACGCCGTCTT CGGCCGCACC
GAGGGAGGCG ACCCGCCGTC CGTCATGACG CTCGGCATCG CCGTCCTCAG CCTGCTGAGT
CGCGCCGCCG ACGACCAGCC GCTGGTCCTC GTGCTCGACG ACGGCCAGTG GCTCGACGAC
CCCAGCGCGG ACGTCTGCGG CTTCGTCGGC CGCCGCCTGA CCGGCAGCCG TGTGAAGCTG
CTGGTGGCGG TACGCACCGA CATCGCCTCG CGGTTCGACA CCGCGGCGCT GCCCGAGCTG
CCGGTCGCCC CGCTGACGCG CGAAGACGCG GCGTTGCTGC TGGACCAGCG CTATCCGCAG
CTCGGCAAGC AGACCCGCCA CACCGTATTG GAGCAGGCGC AAGGGAACCC GCTGGCGCTG
CTGGAGCTGC CGGCGCATCT GTCCGCTCAG CAGGACGACA GCATTCCGGA CGACTTCTTC
GCCCAGCCCG GCGTCGCCCT GCCGCGCCGC CTCCAACACC TGTATGGCGG CCGTATCGCA
GCCCTCAGCG ACACCGTCCG CGCCGAGTTG CTCATGGGCG CCCTGGACGG CGTCGGCTCT
CGGCCCGGAG ACGGCGCGGC GGGCCTGCGC TACCGCATGC ACAACGTCGA CGAAGCGGTG
GCGAGCAAGC TGCTGGAGGT CGATCCGGCC ACCGGCGACG TCACCTTCCG CCACCCGCTC
GTGCGCTCCA GCGTCGTGCA GACCGCCACC CCCAACCAGC GCCGCGCGGC GCACGAGGCG
CTGGCGCACG TCCACCGCAA GAACCTCGAA CGCCGCGCCA CGCACCTGGC CGCCGCGACC
GTCGACCCGA ACGAGGACGT CGCCGACATC CTGGAGGCCG CGGCCGAATC GGCGACCCGG
CGCGGCGGCG CCCTGACCGC CGTGACCTGG CTGACCCGCG CCGCCGAGCT GAGCGTGACG
CACAGCGACC GCTCGCGGCG GCTGTCGGAT GCGGCATTCA TCGCCGGGCA CGCCGCACGC
CTCGGACAAG CGCGCGTGCT GGTCCAGGCC GATGCGGACG CCCACGCCTC GGAGTCGCCG
GCGGCGGTGC TGGCCGCCGG GTATCAGGCC TTGTATCAGG ACGGCGATGT CCGCTCCACC
CACCGCCGCG TCACCGCCGC GATGGAGAAG CTGCGGGATT GCGGTTCAGC GGGGTCCGGG
TCCGGGTCCG AGTCCGAGTC CGGGTCCGGG TCCGGGTCCG AGTCCGAGTC CGGGTCCGAG
TCCGGGTCCG AGTCCGGGTC CGAGTCCGGG TCCGGGTCCG AGTCCGAGGA GGTCCTGGCC
CGACTCGTGA TCCTCCTGTT GGCGATCGCC CAATTCACCG GGGACAGCGG AACCTGGGAG
CGATGCCTGG ATCTCGTGGA GTCGCTCGAG GAACCGGTGG CCGAGCGAGC CCGGCTGTTC
AGCAACACCT GGAGCGACGT GGTCCGGCAC GGTGCGGGCT GGGCCGCGCC GGTGGCTCGG
GCCGTCGCGG ACCTGCCAGA TCTGGAGCCG TGGGAGGTCT CGCGGCTGGC TGTGGCCTCC
TACCACCTGG ACATCCTCAG CGAATACCGT CCCTACCTGC AGCGCGTCGT GGACCGCGAG
CTGGAGACCG GCGCGGTCGC CAGCGGCATG GTGATGCTGC ACCTGATCAT GTTGGACCAG
ATGGCCGTCG GGGAATGGGA CGAGGCCGAA CAGATCGGGC GGCACGTCCT GGAGCTGGCG
ATCGGGCACG GCCACGAGTT GTTCGCCGCC CAAAGCCGCG GCTACCTGGC GCAGCTGGCG
GCGATGCGCG GGCAGGCGGC GCGCGCCAGA GACCTGCAAG CCGAGGTCGA CGCCTGGGCC
CGGCCGCGCG GTCTGGGCTT CCTGACTCAG CTCGCTGATT CCGCCGGCGC GACCGCTGCC
CTCAGTGCCG GGGACTACGA GGCGGCATAC CTCTACGCCA TCGGCATCAC GCCGCCGGGA
TCCTTCCAGG CGTACACGTA TCAGGCCTCG CGCACGCTGC TCGACCTGGT GGAAGCCGCA
CTGCACACCG GACGCGCCGC GCGGGCCCGG CAGCACGCCC TCGCCGCGCG CGAGGCCGGA
CTCCCGGAGA TCTCACCGCG CCTGGCGCTG ATCACGTATG GGGCGCTGGC GATGACCGCG
GAGTCGGATA AGGAGGCTGC GGAGATGTTC ACGCTGGCCG AGTCGCATCC GGAGGCCTCG
CGGTTTCCGT TTGAGCTGGC GCGGATCCAG CTGGCGCACG GCATCCGCGT CCGGCACGTC
GAGGGCCGTG CGGCGGCGCG TGAGTTCCTG GTGCCGGCGG CGGAGGCGTT CGAGCGGCTT
GGCGCGGGAG GCTGGAGCGA ACGCGCGCGC TCGGAAGTGC GCGCCACCGG CACGCCGCCG
CGCGCCTCGA CGCTGAATCT GGCCTCGCTG ACCTGGCAGG AGCGGCGCAT CGCCGACCTG
GCAGCCAGCG GGCTGACGAA CAAGGAGATC GGCAAGCGGA TGCATCTGTC GCCGCGCACC
GTCAGCTCGC ACCTGTATCG CATCTTCCCC AAGCTCGGCA TCACCACCCG CGCGGCGCTG
CGCGATGCGC TGAGCCGCAC TCCGGATGTC TCTCAGGTGT GA
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| Protein sequence | MTTMVGRGEE LARLAAFVTA GTGQALVLRG ETGVGKSALV NHTAASAERE GQRVVQAAGV
EAESELPYAG LHQLLYPVLA ELGPSQDGAW RQLDAVFGRT EGGDPPSVMT LGIAVLSLLS
RAADDQPLVL VLDDGQWLDD PSADVCGFVG RRLTGSRVKL LVAVRTDIAS RFDTAALPEL
PVAPLTREDA ALLLDQRYPQ LGKQTRHTVL EQAQGNPLAL LELPAHLSAQ QDDSIPDDFF
AQPGVALPRR LQHLYGGRIA ALSDTVRAEL LMGALDGVGS RPGDGAAGLR YRMHNVDEAV
ASKLLEVDPA TGDVTFRHPL VRSSVVQTAT PNQRRAAHEA LAHVHRKNLE RRATHLAAAT
VDPNEDVADI LEAAAESATR RGGALTAVTW LTRAAELSVT HSDRSRRLSD AAFIAGHAAR
LGQARVLVQA DADAHASESP AAVLAAGYQA LYQDGDVRST HRRVTAAMEK LRDCGSAGSG
SGSESESGSG SGSESESGSE SGSESGSESG SGSESEEVLA RLVILLLAIA QFTGDSGTWE
RCLDLVESLE EPVAERARLF SNTWSDVVRH GAGWAAPVAR AVADLPDLEP WEVSRLAVAS
YHLDILSEYR PYLQRVVDRE LETGAVASGM VMLHLIMLDQ MAVGEWDEAE QIGRHVLELA
IGHGHELFAA QSRGYLAQLA AMRGQAARAR DLQAEVDAWA RPRGLGFLTQ LADSAGATAA
LSAGDYEAAY LYAIGITPPG SFQAYTYQAS RTLLDLVEAA LHTGRAARAR QHALAAREAG
LPEISPRLAL ITYGALAMTA ESDKEAAEMF TLAESHPEAS RFPFELARIQ LAHGIRVRHV
EGRAAAREFL VPAAEAFERL GAGGWSERAR SEVRATGTPP RASTLNLASL TWQERRIADL
AASGLTNKEI GKRMHLSPRT VSSHLYRIFP KLGITTRAAL RDALSRTPDV SQV
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