| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5138 |
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| Symbol | |
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| ID | 8336492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5896868 |
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| End bp | 5897848 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644958236 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003115838 |
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| Protein GI | 256394274 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0813346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCG CGACCGCCGG CACGCCCACC GACACCGACA CCGACACGGC GCTGGTCCGC
GCCGCGCAAA CCGGCGACGT CGCGGCACTG GCGCTCCTGC TCGAGCAGCA CCGCGCCGGC
ATGCGCGCCG TGGCGTTGAG CATCCTGGGT CCGGGCCCGG ATGCGGACGA CGCCATCCAG
GACGCGGTCC TGGTCGCGCT GCGCCGGATC GGCGACGTGC GGGACCCGGC CGCCGCCGGG
GCGTGGCTGC GGATGATCGT GCGCAACCAG TGCCGCGGGC AGCTGCGGGA CGCGCAGCGC
CTCGTTCCCC TCGACGAGCT GGCCTCGCAC CGGGATTCGG CTCCCGGCCC GGACGAGCTG
CTCGAAAACC ACGCGATGCA GGACTGGCTC TGGGAGGCGA TCGAGCAGCT GTCCCCGGCG
CTGCGGCTCA CGCTCGTGCT GCGCCACTTC AGCGAGCACG TCACCGCCTA CGACCAGATC
GCCCGCGTCT GCGGCGTCCC GGCCGGCACC GTCCGCAGCA GGCTGAACCA GGCGCGCGCC
AAGCTCGCCG CCGCGCTCGC CGCCACCGCC GAGGCCGCGC ACAGCGACGC CCGCACGCGC
ACCGCCGCGA GCTGGGACGA GGCGCACGAC ACCCTCGCCA CCGCCGAAGC CGGCGAGTTC
GGGCGGGTCG TCGCGCAGCG CTGGTCGCCG GACGTGGCGC TGATGTACGG GGGGTCCCGG
CTCGGCGGCA GTGCCCTGAT CACCCGCGCG ATGGACTGCG ATCTGGCTGC CGGCGTACGT
CAGCGGCCGG TGAAGGTGAT CGCCGGCCGG TCGCTGGCGG TGTGGGAGAT GGACATCACC
AGCCCGCCCG ACAACCCCGA ACACTGCCCG CCGACCGCGG CGTGGGTCAT GGACCTCGAC
GGCGGCAGGG TCGCGCGGCT CCGGCTGTTC CACCCGCGTC CGCTGGCCGA ATCCGTGATG
GAGCAACGGC TCGCGGCCTA G
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| Protein sequence | MSTATAGTPT DTDTDTALVR AAQTGDVAAL ALLLEQHRAG MRAVALSILG PGPDADDAIQ
DAVLVALRRI GDVRDPAAAG AWLRMIVRNQ CRGQLRDAQR LVPLDELASH RDSAPGPDEL
LENHAMQDWL WEAIEQLSPA LRLTLVLRHF SEHVTAYDQI ARVCGVPAGT VRSRLNQARA
KLAAALAATA EAAHSDARTR TAASWDEAHD TLATAEAGEF GRVVAQRWSP DVALMYGGSR
LGGSALITRA MDCDLAAGVR QRPVKVIAGR SLAVWEMDIT SPPDNPEHCP PTAAWVMDLD
GGRVARLRLF HPRPLAESVM EQRLAA
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