Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5131 |
Symbol | |
ID | 8336485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5889854 |
End bp | 5891317 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958229 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003115831 |
Protein GI | 256394267 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.22804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG AGTCCACACG GACCACTGAG ACCGCCTCCC TCCGACCCCC TTCCGAACCC GCCCTCCCCG ATCCCCGCCG CTGGTGGGTC CTGGCCGCGG TCGCCGCGGC GCAGCTGATG ATCGGCCTGG ACCTGACGAT CGTGAACATC GCGCTGCCGT CGATGCAGCG CTCGCTGGGC CTGTCCGATC CCGCGCGCCA ATGGGTGATC ACGATCTTCG CGCTCTGCTA CGGCGGCCTG CTCCTGCTGG GCGGCCGCAT GTCAGACCTC ATCGGCCGCC GGCGCGCGCT GATGATCGGT CTGACGGGCT TCGCCTTGGC CTCCGCGCTC GGCGGCGCGG CGACCGACCC GGCGATGCTG CTCGGCTCAC GCGCCGCTCA GGGCGTGTTC GGGGCGCTGC TGACGCCGGC GGTGCTCGCG ACACTCGCGA CCACGTTCAC CGTTCCTGCC GAACGCGGCA GGGCTTTCGG TATCTATGGA ACCGCGATGG GCAGCGCGTC CGGCGTCGGC GTCATGCTGG GCGGCGTGCT CACCCAGTAC CTCGACTGGC GCTGGTGCAT GTATGTGAAC GTGCCGATCG CGATCGCTGC CGCGGCCGGG GTTCTGTACG CGGTGCGTCC CGTTCCGCGC AACGCCGGGG TGCGTGTCGA CGTGCTCGGT GCGCTGCTGG CGACCGGGGG CATCATGGCT CTGGTCTTCG GCTTCGCTCG GGCTCAGACC GACGGGTGGA GTGCGGCGAT CACCGTTGTG CCGCTGGTGA TCGGGGTGCT GACGCTGGTC GCCTTCGTGT TCGTGCAGGC TCGGACCGCC AAGCCGCTCC TTCCGCTGCG GGTCGTCCTC AACCGGCGGC GAGCCGGCTC CTACCTGGCG GTGTTCAGCC TGGCTGTCGG CATGTTCGCC GCGCTGTTCT TCCTGACGTT CTTCCTGCAG AACGTCCTGG GCTACTCACC GATCCGCGCC GGTCTGGCCT TCCTGCCTCT GACGGTCGGA CTCATCGCCG GAGTGCGGGC GGTGACCAAG CTTCTACCGC GCGCGCCGGT GCGCTTGCTG CTGTGCCCGG GCCTGCTGAC CATCGCAACC GGTCTGGCCC TGCTCGGCGT CGTGAAGGCT GACAGTGGCT ACTGGCTTCA TGTGTTCCCC GTGTTCTTCC TCGTCGGTAT CGGCACCGGG TGGGTGCTGA TCACCGCGAA CAGCGCGGCG ACACTGGGCG CCGGTCAGGA CACCGCGGTG GCGGGAGCGA TGGTCATGAC CTCACAACAG ATCGGCGCGT CCCTCGGCAC GGCGGTGCTC AGCACGATCG CCGGAACGGC TGCCGCCGGA TACCTCCACG GGCACCCCGG CTCCGGCGCC AGGGCTGTGG TCCACGGCTT CGACGTCGCG AGCCTCGGCG CCGCCGGGTT CCTCTGCCTG GCCGCGGTGA CGGTCTTCCT CGTCAGCGGC AGGGGCGAAC CGAAGGTCCG GTAA
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Protein sequence | MTTESTRTTE TASLRPPSEP ALPDPRRWWV LAAVAAAQLM IGLDLTIVNI ALPSMQRSLG LSDPARQWVI TIFALCYGGL LLLGGRMSDL IGRRRALMIG LTGFALASAL GGAATDPAML LGSRAAQGVF GALLTPAVLA TLATTFTVPA ERGRAFGIYG TAMGSASGVG VMLGGVLTQY LDWRWCMYVN VPIAIAAAAG VLYAVRPVPR NAGVRVDVLG ALLATGGIMA LVFGFARAQT DGWSAAITVV PLVIGVLTLV AFVFVQARTA KPLLPLRVVL NRRRAGSYLA VFSLAVGMFA ALFFLTFFLQ NVLGYSPIRA GLAFLPLTVG LIAGVRAVTK LLPRAPVRLL LCPGLLTIAT GLALLGVVKA DSGYWLHVFP VFFLVGIGTG WVLITANSAA TLGAGQDTAV AGAMVMTSQQ IGASLGTAVL STIAGTAAAG YLHGHPGSGA RAVVHGFDVA SLGAAGFLCL AAVTVFLVSG RGEPKVR
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