Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5130 |
Symbol | |
ID | 8336484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5888720 |
End bp | 5889559 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958228 |
Product | alpha/beta hydrolase fold protein-3 domain protein |
Protein accession | YP_003115830 |
Protein GI | 256394266 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.957663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC TTGTTCACGA AGGCCTGACC TACGCCGAGA TCCAGGGCTA CCGGCCGCTC CTGCTCGACC TGCACCTCCC GGTGACCGCC AGTCCGCAGT CGCCGGTGCC GGTCGTGGTC TGGATGCACG GCGGCGCGTT CTGGGAGGGC GATCGCAGGT ATCTGCCGTC GAATCTCGCC CCGAACGCGG TGTTCGACAC GCTGGTGGCG TCCGGCATCG CCGCCGCGAC GATCGACTAC CGGCTCTCCG GCGAGGCTAC ATACCCGGCG CAGCTGCACG ATGTCCGGGC CGCGATCAGA TATCTGCGTT CCAACGCCGC CACCTGGGGA TTGGACGCCA CGCGCGTGGG CGTCTGGGGC GAGTCGTCCG GCGGGACGCT CGGCGCGCTC GCAGCCCTCG CCCCCACCGA CAGCGACGCC ACCAGCGCCA CCAACGCCAC CAACGCCACC AACGCCACCG ACCAACCGAT CACCGCCGCC GCCCTGTGGT GCTCCCCCAC CGATCTGGTG TCACTGCGCC ACTTCAGCGC GATCTCCGGA CTTCTCGGCG GCGGCGACCC CGAGGCGCTG GAAGCCGCAG CCGTGCAGGC CAGCCCTCTG ACCCACGTCC GCGGCGACGC GCCGGCGTTC CTCATCATGC ACGGCGACGC CGACCGCACA GTGCCGGTCC ACCAAGCCGA ACTCCTGCAC AAAGCCCTGC TCGCCGTCGG AGCACGCTCC ACCTTCACAG CCGTCGAGGG TGCCGGCCAC GTCTTCGACG GACACCCCGA CGCTCAGCAG CTCGTCGAGC AGGTTGTGGC CTTCTTCGCC CAGGAGTTCG CGCAGCCCGC TGCGGCCTAG
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Protein sequence | MSTLVHEGLT YAEIQGYRPL LLDLHLPVTA SPQSPVPVVV WMHGGAFWEG DRRYLPSNLA PNAVFDTLVA SGIAAATIDY RLSGEATYPA QLHDVRAAIR YLRSNAATWG LDATRVGVWG ESSGGTLGAL AALAPTDSDA TSATNATNAT NATDQPITAA ALWCSPTDLV SLRHFSAISG LLGGGDPEAL EAAAVQASPL THVRGDAPAF LIMHGDADRT VPVHQAELLH KALLAVGARS TFTAVEGAGH VFDGHPDAQQ LVEQVVAFFA QEFAQPAAA
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