Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5126 |
Symbol | |
ID | 8336480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5884915 |
End bp | 5885682 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644958224 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003115826 |
Protein GI | 256394262 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGAC CCGTGCAGTC CATCGAACGC GCGGCAGCGA TCCTGCGCCT GCTGGCGCGC GGTTCCGGAC GGCTCGGGGT CGGCGAGATA GCGGCGTCCC TGGGCCTGGC GAAGGGGACC ACGCACGGCA TCCTGCGCAC GCTGCAGGGC GTGGGCTTCG TCGAGCAGGA CAAGTCCAGC GGCAAGTACC AGCTCGGCGC CACCCTGCTG CACCTGGGCA CCAGCTACCT GGACGTGAAC GAGCTGCGCT CCCGGGCGAT CAACTGGGCC GACGCGCTGG CCGCCCGCAG CGGCGAGGCG GTGTGGATCG GGACCCTGCT GGAGGGCAAG GTCTTGATCG TGCACCACGT CTTCCGGCCG GACGACTCCC TGCAGAGCCT GGACGTCGGC GCGCTGCTGC CGCTGCACGC CAGCGCGCTG GGCAAGGTCC TGCTCGCCTA CGACACCCAG GCGGCGGCCG AACTGCGCGA GGCCGAACTC GCGCCGCTCA CCCGGCGCAC CCTGGTCACC CCGGCCGCCC TGCGCCGGGA GCTGACGAAG GTGCGCGACC ACGGCTACGC CACCGAGATC GAGGAGTCGA CGCTCGGCCA GGCCTCGATC GCCGCGCCGA TCCGCGGCTA CGGCGGGCTC GTGGTCGGCG CGATCAGCAT CACCGGCGCG GTGGACCGGG TGTGTCCCAC CACCGGCAAA CCCGACCCGA CGCTGGCCGA CGCCGTGCAG AACGCCGCGC AGATGATCTC GCGGGACCTC GGCGCGGGAC GCTGGTAA
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Protein sequence | MPGPVQSIER AAAILRLLAR GSGRLGVGEI AASLGLAKGT THGILRTLQG VGFVEQDKSS GKYQLGATLL HLGTSYLDVN ELRSRAINWA DALAARSGEA VWIGTLLEGK VLIVHHVFRP DDSLQSLDVG ALLPLHASAL GKVLLAYDTQ AAAELREAEL APLTRRTLVT PAALRRELTK VRDHGYATEI EESTLGQASI AAPIRGYGGL VVGAISITGA VDRVCPTTGK PDPTLADAVQ NAAQMISRDL GAGRW
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