Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5120 |
Symbol | |
ID | 8336474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5877775 |
End bp | 5878392 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644958218 |
Product | DoxX family protein |
Protein accession | YP_003115820 |
Protein GI | 256394256 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.996543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAGCC GAGGACTACG CACCGACCTG GGCCTGTTGG CACTACGCCT GGGCACCGGC GGCATCCTGA TCGCCCACGG CACCCAAAAA CTCTTCGGCT GGTTCGGCGG CCGCGGCCCC AAAGGCACCG CCGCGACAAT GCACGCGATG GGCTTCCGCC CCGGCCTCCC CAACGCCCTG ACGGCCGGCC TCAGCGAAAC AGCCGGCGGC ACCCTCCTAG CCCTCGGCGC CGCAACCCCA GCCGGCGGCG CCGCAGCCCT CGGCGCAATG TCAGCAGCAG CAGCGGTCCA TCACCCATCC GGCTTCTTCA ACAGCACCGG CGGCTACGAA TACCCGGCCT TCCTAGCCCT CACCGCAACA GGCCTGGCAG TCGCCGGCCC AGGCCGATTC TCAGTCGACC ACGCCACCGA CAACCGCCTG AACACCCCAC CAGTGCTCCT CAGCGCCTTC GCCGCCAGCG CACTGGCCGC GACGGAGGTC CTCCGCCGCC GAACGAAGGT CATGGCGGCA CAGGCTGCGG CGGCAGGGGA CGAAGCCGAC GCGGAGGATG AAGCCGACTC GGGGGAGACG GACAACGCGA CGCAAGCGGC GCACGATGCG GCGGCCGACC TGCCGTGA
|
Protein sequence | MASRGLRTDL GLLALRLGTG GILIAHGTQK LFGWFGGRGP KGTAATMHAM GFRPGLPNAL TAGLSETAGG TLLALGAATP AGGAAALGAM SAAAAVHHPS GFFNSTGGYE YPAFLALTAT GLAVAGPGRF SVDHATDNRL NTPPVLLSAF AASALAATEV LRRRTKVMAA QAAAAGDEAD AEDEADSGET DNATQAAHDA AADLP
|
| |