Gene Caci_5120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5120 
Symbol 
ID8336474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5877775 
End bp5878392 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content71% 
IMG OID644958218 
ProductDoxX family protein 
Protein accessionYP_003115820 
Protein GI256394256 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.996543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCC GAGGACTACG CACCGACCTG GGCCTGTTGG CACTACGCCT GGGCACCGGC 
GGCATCCTGA TCGCCCACGG CACCCAAAAA CTCTTCGGCT GGTTCGGCGG CCGCGGCCCC
AAAGGCACCG CCGCGACAAT GCACGCGATG GGCTTCCGCC CCGGCCTCCC CAACGCCCTG
ACGGCCGGCC TCAGCGAAAC AGCCGGCGGC ACCCTCCTAG CCCTCGGCGC CGCAACCCCA
GCCGGCGGCG CCGCAGCCCT CGGCGCAATG TCAGCAGCAG CAGCGGTCCA TCACCCATCC
GGCTTCTTCA ACAGCACCGG CGGCTACGAA TACCCGGCCT TCCTAGCCCT CACCGCAACA
GGCCTGGCAG TCGCCGGCCC AGGCCGATTC TCAGTCGACC ACGCCACCGA CAACCGCCTG
AACACCCCAC CAGTGCTCCT CAGCGCCTTC GCCGCCAGCG CACTGGCCGC GACGGAGGTC
CTCCGCCGCC GAACGAAGGT CATGGCGGCA CAGGCTGCGG CGGCAGGGGA CGAAGCCGAC
GCGGAGGATG AAGCCGACTC GGGGGAGACG GACAACGCGA CGCAAGCGGC GCACGATGCG
GCGGCCGACC TGCCGTGA
 
Protein sequence
MASRGLRTDL GLLALRLGTG GILIAHGTQK LFGWFGGRGP KGTAATMHAM GFRPGLPNAL 
TAGLSETAGG TLLALGAATP AGGAAALGAM SAAAAVHHPS GFFNSTGGYE YPAFLALTAT
GLAVAGPGRF SVDHATDNRL NTPPVLLSAF AASALAATEV LRRRTKVMAA QAAAAGDEAD
AEDEADSGET DNATQAAHDA AADLP