Gene Caci_5118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5118 
Symbol 
ID8336472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5875443 
End bp5876372 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID644958216 
Productaldo/keto reductase 
Protein accessionYP_003115818 
Protein GI256394254 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.456075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTT CCGACACCGC CACCGCCCCA GCACCCGGCG GGACCGCCAC GCTCGCCGGA 
CACCAGGTCG CCCGCATCGG ATTCGGCGTC ATGCAGCTCG CCGAGCACCG CCCGGGACGC
CAGCCGATCG ACCGCGACGC CGCCATAGCG ATCCTGCGCA CGGCCGTCGC CAGCGGCATC
AACCACCTCG ACACCGCCGA CTTCTACGGC ACCAACGCCG CCAACGCCAA CGACCTGATC
CGCGCCGCCC TGCACCCCTA TCCCGAGAGC CTCGTGCTCG CGACCAAAGT CGGCGCGGAG
CGCGACGCCG CCGGAGCCCT GGTGCCGGCG CAGCGTCCCG AGCAACTGCG CGCCGGCGTC
GAGGCGAACC TCGCGCGCCT CGGCGCCGAG CGGCTAGCGG TGGTCAACCT CCGCCGCGTG
GACGCCGCGC CCGGCATCAT CGCCGAGGGC GACCAGATCG TCGATCTCGA CAGCCAGCTC
GCCGAGCTCG TGGCGTTGCG CGACGCCGGC AAAGTCGACG GCATCGGCCT GAGTAACGTC
AGCGTCGACC AGCTCCGCCA GGCGCTGCCC GCAGGGATCG CGTGCGTGCA GAACTCCCAC
AGTCCGGTCG ACCGCGCCGC CGAGCCGGTG CTCGATCTGT GCCGGAAACA CGACATCGCC
TGGGTCCCGT TCTGCCCGCT CGGGTCGGCG TTCCCGCAGT GGCCCAAGGT CGCCGATCAG
CCGGCGGTTC GCGATGCGGC CGAGGCGCTG GGCGTCACAT CGATCCAGGT CGGACTGGCT
TGGCATCTGG CGCACTACGC GCACACCCTG CTGATCGCCG GCACGGCCGA TCCCGCGCAT
CTCGCCGAGA ACATCGCCGC AGGGGACGTA CGCCTCGATT CCGGGACACG CGCCGCACTC
GACGCGATCA CCGTCCCGCC GCCCTCCTGA
 
Protein sequence
MNSSDTATAP APGGTATLAG HQVARIGFGV MQLAEHRPGR QPIDRDAAIA ILRTAVASGI 
NHLDTADFYG TNAANANDLI RAALHPYPES LVLATKVGAE RDAAGALVPA QRPEQLRAGV
EANLARLGAE RLAVVNLRRV DAAPGIIAEG DQIVDLDSQL AELVALRDAG KVDGIGLSNV
SVDQLRQALP AGIACVQNSH SPVDRAAEPV LDLCRKHDIA WVPFCPLGSA FPQWPKVADQ
PAVRDAAEAL GVTSIQVGLA WHLAHYAHTL LIAGTADPAH LAENIAAGDV RLDSGTRAAL
DAITVPPPS