| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5107 |
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| Symbol | |
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| ID | 8336461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5864558 |
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| End bp | 5866621 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958205 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_003115807 |
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| Protein GI | 256394243 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCCTG TTTCCCGCCG CACCTTCCTC GGCTCCGCCG CCGCCCTCGG CGCGACCCTC
GGCCTGGAGA GCCTGCCCGG CTCGATCTCG CAGGCCGCCG CCACCGGCAC CGGGACGATC
CGCGACGTCA AGCACGTCGT GGTGCTGATG CAGGAGAACC GCAGCTTCGA CCACTACTTC
GGGAGCCTGC AGGGGGTGCG CGGGTTCGCC GACCGCGCGA CGGTCCAGAT CGCGGGCGGC
TACTCGGTGT TCAACCAGCC GAACGGCTCC GGGCGGCAGT ACCCGTGGCA GCTGTCCGAC
ACCAACACCT GGTGGTTCGG GACCACCAAG GAAGAGCTCG CACAATGCGA CGGCTCGCTG
GATCACAGCT GGTCCACCCA GCACGCCGCC TGGAACAGCG GCAAGATGGA CAGCTGGATC
TCGGCCAAGG GCTCCAACCG GACCATGGGC TTCCTGAACC GCACCGACAT CCCGTTCCAC
TACGCGCTCG CCGACGCCTA CACGGTCTGC GACGCCTACC ACTGCTCGAT CCTGTCGGCG
ACCGGCCCGA ACCGCACCTA CCTGTGGTCC GGCATGATCG ACCCGAACGG CACGGCCGGC
GGACCGGCGT ACGACGGCGG CTCGGAGTCC AACCTGAGCT GGCAGACCTA CGCCGAAGCG
CTGCAGAACG CCGGGGTGTC CTGGCGGGTG TATCAGAACG CGAACGACAA TTACGGCGAC
AACGCGCTGG CCTACTTCAA GCAGTTCACC GGCGCCGCCA CGTCCAGCCC GCTCTACCAG
CGCGGCATGT CCTCGGTCCC GGCGGCCAAG AACTCCACCC CGGACGACAT CGCCGCGGCG
ATCAAGGCCG ACGTGCTCGG CGGCACGCTG CCGCAGGTGT CGTGGGTGGT GGCCAACCAG
GCGTTCTCCG AGCACCCCGA CGCCCCGCCG AACGACGGCG CGCACTTCGT GAACCTGGTC
GTCCAGGCGC TCGCCGCCGA CCCCGCGACG TTCGACTCCA CCGTGCTGTT CCTCAACTAC
GACGAGAACG ACGGCTTCTT CGACCACGTC CCGCCGCCGG TCGCGCCGTC CGGGACCGCT
GCCGAGAGCA CCCATGGCGC GCCGGTCGGG CTGGGCTTCC GCGTCCCGAT GGTCGTGGTC
TCGCCGTGGA CCCGCGGCGG CTGGGTCGAT TCGCAGGTCT ACGACCACAC CTCGGTGATC
CGCTTCCTGG AGACCTGGAC CGCGGCCCTG GGCACCCCGG CGACGTGCCC GAACATCAGC
GCCTGGCGCC GCCAGGTCTG CGGCGACCTC ACCGGCGCCT TCGACTTCGG CCACCCGGTC
AGCGGTCTGC CGAGCCTGCC GGCGACCAGC ACGGTGATCG GGCAGTCGTT CTGCAACGCG
CAGACCAACC CCAGCCCGGC GACCAACGCG CTGCCGGCGC AGGAGAGCGG GACACGTCCG
GCGCGGGCGC TGCCGTACCA GCCGAACGCG TGGGTGGACC ACCTGGAGTA CGACGCCAAC
GGGCAGATCC TGATCTGGCT CCAGATGGCG AACCAGGGTC CGCAGGCGAG CGCCGCCGCG
CACTTCTCGG CGTATGCGAA CGCTTATCGC AGCGGCGGTC CGTGGCAGTA CACGGTCGGC
GCGTCCAGCA ACGGGACCGA CGGCAGCGCC AAGGACTTCT TCAACATCGG CACGAACTAC
GGCAACGGCC AGTACGACCT GACGGTGGTC GGCCCGAACC GCTTCCTGCG GCGCTTCGCC
GGCAACGCCA ACGGCAGCGG CGCGACCGCC GAGGCGAGCA CGTACTACGC GCCGGCGCCG
AACACCGGGC AGCAGGCGGT GTGGTTCTCG ATGAAGAACA CCGGGACCAG CACGGTCACG
TTCACGATCA CCTCGACCAA CTACCGCACC GACGGTCCGT GGACGTACCA GGTGGCGGCC
GGGGCGACGG TCGCCGACTA CTTCAACGCG GTCGCCTACG ACCACGGGTG GTACGACTTC
ACCGTCACGG TGAGCTCGGA TGCGGCGTGG AGCCGCCGGG CGACCGGGCA CATCGAGACC
GGGGCGGCGA GCGTTACCGG CTGA
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| Protein sequence | MAPVSRRTFL GSAAALGATL GLESLPGSIS QAAATGTGTI RDVKHVVVLM QENRSFDHYF
GSLQGVRGFA DRATVQIAGG YSVFNQPNGS GRQYPWQLSD TNTWWFGTTK EELAQCDGSL
DHSWSTQHAA WNSGKMDSWI SAKGSNRTMG FLNRTDIPFH YALADAYTVC DAYHCSILSA
TGPNRTYLWS GMIDPNGTAG GPAYDGGSES NLSWQTYAEA LQNAGVSWRV YQNANDNYGD
NALAYFKQFT GAATSSPLYQ RGMSSVPAAK NSTPDDIAAA IKADVLGGTL PQVSWVVANQ
AFSEHPDAPP NDGAHFVNLV VQALAADPAT FDSTVLFLNY DENDGFFDHV PPPVAPSGTA
AESTHGAPVG LGFRVPMVVV SPWTRGGWVD SQVYDHTSVI RFLETWTAAL GTPATCPNIS
AWRRQVCGDL TGAFDFGHPV SGLPSLPATS TVIGQSFCNA QTNPSPATNA LPAQESGTRP
ARALPYQPNA WVDHLEYDAN GQILIWLQMA NQGPQASAAA HFSAYANAYR SGGPWQYTVG
ASSNGTDGSA KDFFNIGTNY GNGQYDLTVV GPNRFLRRFA GNANGSGATA EASTYYAPAP
NTGQQAVWFS MKNTGTSTVT FTITSTNYRT DGPWTYQVAA GATVADYFNA VAYDHGWYDF
TVTVSSDAAW SRRATGHIET GAASVTG
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