Gene Caci_5106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5106 
Symbol 
ID8336460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5862905 
End bp5864299 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content71% 
IMG OID644958204 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003115806 
Protein GI256394242 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4934] Predicted protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.814662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGGA CCTCATCAGG GCTCGGCCAC CGCCGGGTCC TCCGCACGGG CGCCAGGCTC 
GCCGCCGCCG GAACGGCGGT CGCGCTGTCC GTCGCCCTCG GGGTCGCCGC GAACGCGGCC
GACGCCGCGC CGGGCGCGAT CCCGCATCCG GTCCCCACCC CCGGGCACCA GCACCACCAC
TTCAGCGCCG CCGTCAGCGA GGTGGGCGCC GCCACGACGC TCCCGGACCG GGTCAAGCGC
GTCGAGCAGG CGCTGCAGTC GTCCTCCTCG CAGCTGCAGA AGGCTTACGA CACCGCGCCG
CTGTACGCCA AGCACATCGA CGGCACGGGC CTGACGATCG CCACGCTGGT GGCCTTCGGC
GACAAGAACG CCCAGAGCTA CCTCAACCAG TACGACAGGG AGAACGGCCT GCCGGCCGCG
ACCGTGACCA CCATCGAGCC GGCCGGCGCC GTGCCGGCGT GCACCGACCC GGGCGTCGAC
ACCGGCGACT GCGACGGCTG GGGCGGCGAG ACCGACCTGG ACATCTCGAT GATCCACACC
CTCGCCCCCG GTGCGAAGAT CCTCATCATC GCCACCCCGG TCAGCGAGAC CGAGGGCATC
ACCGGCTTCC CGGAGCTGAT GTCCGCGCTG GACTCCACCG TCGCCCACCA CCAGGCCGAC
GTCGTCTCGA TGAGCATGGG CACCCCCGAA GACGACTTCG CCAGCTCAGC CCAGCTGCAC
ACCCTGGACA GCCACTTCAA GAACGCCACC GACCACGGCG TCACCGTCCT GGCCTCCAGC
GGCGACGACG GCGCCGACGG CATGCACCTG GACGGCACCA CACCCTGGGG CAAGCGCGTC
GTGTCCTTCC CCGCCGACGA GTCCTACGTC ACCGCGGTCG GCGGCACCGT CCTCTCCCTG
AACACCAGCG GCACCCGCAC CAAGCCCGAC AAACTCTGGC CCGAATCCGG CGCCGGCGTA
TCCCACGAAT TCGCCATCCC CTCCTGGCAG CAGACCACCG CCACCACCAC CCACGCCACA
GGGCGCTCAC TACCGGACAT CACCCTGGAG GGCACCTCCG GCACCTCGGA ATCCTCACCC
CTGATGGCCG CCATCGTCGC ACTCGCGGAC CAATCCGCCG GCCACGACCT CGGCCTGATC
AACCCCGCCC TCTACGCCGT CGGTCCACAC GGCACCACCT CCGGCATCGT CGACGTGACC
AAGGGCTGCA ACTCGACCTC CTCAGTAACC GGCTTCTGCG CCACCACCGG CTTCGACACC
GCCTCCGGCT GGGGCACGAT CGACGCCGCG AAGTTCGTGC CGGCGTTGGT CGCGGCTTCG
GGATCAACCA GCAGCATTCG GATCGATAAC GGCGGTCGCG TGCCAGGGCG CGTCTCGCTC
AGCACGACGC AGTGA
 
Protein sequence
MHRTSSGLGH RRVLRTGARL AAAGTAVALS VALGVAANAA DAAPGAIPHP VPTPGHQHHH 
FSAAVSEVGA ATTLPDRVKR VEQALQSSSS QLQKAYDTAP LYAKHIDGTG LTIATLVAFG
DKNAQSYLNQ YDRENGLPAA TVTTIEPAGA VPACTDPGVD TGDCDGWGGE TDLDISMIHT
LAPGAKILII ATPVSETEGI TGFPELMSAL DSTVAHHQAD VVSMSMGTPE DDFASSAQLH
TLDSHFKNAT DHGVTVLASS GDDGADGMHL DGTTPWGKRV VSFPADESYV TAVGGTVLSL
NTSGTRTKPD KLWPESGAGV SHEFAIPSWQ QTTATTTHAT GRSLPDITLE GTSGTSESSP
LMAAIVALAD QSAGHDLGLI NPALYAVGPH GTTSGIVDVT KGCNSTSSVT GFCATTGFDT
ASGWGTIDAA KFVPALVAAS GSTSSIRIDN GGRVPGRVSL STTQ