Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5104 |
Symbol | |
ID | 8336458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5861426 |
End bp | 5862640 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958203 |
Product | ROK family protein |
Protein accession | YP_003115805 |
Protein GI | 256394241 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.288839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.92903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCAGG CCGGTGCGCA GACGACGCGC GATCTTCGCC GTCGTAGCCG CGCCACCTTG CTGTCGTGTA TCTACCTCGG GCGGGCGGTG AGCCGTCCGG AATTGGCGCG GTTGGCCGGG ATGAGCTCGG CGGCGGTGAG CAATGTCGTG TCGGATCTGA TCTCCGACGG GCTGGTGGCC GAGGCCGGGT CGGTGGACTC CAACGGTGGG CGGCCGCGCA CGATGCTCGC GGCGCGGCCC GGGTTCGGCT ACGCGGTCGG CGTCGACATC GGCGAGACTC ACATCCACGT GGTGCTGTTC GACTGGACGC TGTCCACCCT GGCGACCTCC ACGCACGAGA TCCGCGTCGG ACGCCTGGAT CCGGATGTCG TGGTGCGCCT GGTCGTCTCC GGCGTGCGCT CCCTGCTGGA CAGCACCGGC GTTCCGCACG AGCGGCTGCT CGGTATCGGT ATCGGCGTCC CCGGCGCGGT GCAGGAGGGC GAGCGCGGCG TGGTCCACGC ACCGACGCTC GGCTGGTCCG GCGTACCGCT CGGCGACGCA CTGCGAGCAG AGCTCGACGC GCCGATCCTC ATCGACAACT GCGCACGCAC CCTCGGCCAG GCTGAGGCAT GGCGCGGCGC GGGACGCGAT GCACGCCGCG CGGTCGTCGC CCTGTGGGGC GTGGGCGTCG GCGCCGCGAT CGCCGAAGGC TCCTCCCTTG CCGAAAGCGG CTCCAGCTCC ACCAGCGAGT GGGGCCACGC GGTGATCGAA GCCCGCGGCC GCGCCTGCCG CTGCGGCTCC CACGGCTGCC TCGAGGCCTA CGTCGGCGCC ACGGCGATCC TCGACGCGTA CCTGGCCCAC CCCGCCGGCA AGCCCTTCAC CAGCGACGGC ACCGAAGCCA AAATGGCCGA ACTCGCCGCC CGAGCCACCA CCGGCGCCGA CGAAGCCGCC ACCGCCACCT TCGACGAAGC AGCCGAGTAC CTGGGCATCG GCGTCGGCAA CCTGATCAAC ATGATCAACC CCGACCAGGT CATCCTCGCC GGCTGGGTAG GCGAACAACT GGGCCCCCTC CTCATGCCCG CCATCCGCGA AGCCGCCCGC CGCCACGCCC TCCCCTACCT CTTCGACCAA ACCCGCATCG ACGTCGGCGA ACTGGGCCCG GGCGCGGTAG CCCTCGGCGC CGCAACCCTG CCGGTGGCGC GACTGCTGGC AGCAGGCGGA CACTTCGCAA GCTGA
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Protein sequence | MIQAGAQTTR DLRRRSRATL LSCIYLGRAV SRPELARLAG MSSAAVSNVV SDLISDGLVA EAGSVDSNGG RPRTMLAARP GFGYAVGVDI GETHIHVVLF DWTLSTLATS THEIRVGRLD PDVVVRLVVS GVRSLLDSTG VPHERLLGIG IGVPGAVQEG ERGVVHAPTL GWSGVPLGDA LRAELDAPIL IDNCARTLGQ AEAWRGAGRD ARRAVVALWG VGVGAAIAEG SSLAESGSSS TSEWGHAVIE ARGRACRCGS HGCLEAYVGA TAILDAYLAH PAGKPFTSDG TEAKMAELAA RATTGADEAA TATFDEAAEY LGIGVGNLIN MINPDQVILA GWVGEQLGPL LMPAIREAAR RHALPYLFDQ TRIDVGELGP GAVALGAATL PVARLLAAGG HFAS
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