Gene Caci_5103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5103 
Symbol 
ID8336457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5860508 
End bp5861263 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID644958202 
Producthypothetical protein 
Protein accessionYP_003115804 
Protein GI256394240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.059439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.368193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT TCCACGATGT GTCGATCAAC TTGCTGTCCG CCTTGATCGG CCTGACTGCG 
GGGTGGGCCC GTGGAGCGGC GGCGAATCGG CTTCGCTACC GACACGCTCG CGGGCTCTGG
CGTCAACTCG CAGGGCCGAC GGTCAACATC GTCGTCGGAG CGCACAGCGT AACCGGGTGG
GAGACTGCCG GGTTGATGGG CATCGGCGAT GCCTTTGCGG TGTCCGAACT GCAGCAGCAT
CTCGTCAGTA TCGGAGCCGG CCAACCGAAG ATCATCTACG GCGGACGGCT GGAGGCCGAG
ACTCGGCGCA ACGATCTGAT CCTCATCGGG GGTCCCGACA CCAATTCGAT GACTCGCGAG
GTCATGAAGC GATTGGCTGG GACGTTCAAG TTTCTCGATC CGCCCGCCCA TACGTTTGCC
ATCCGAGACG CACACGGAGG AAAGACCTAT GACCCGGATC CCCCTACGAA CGGCGAGGGT
ACTGACTTCG GCGTTCTAGT CCGTGCAGTG AACCCGTTCA ATCCGGAGGC CTCGGTACTG
ATTGTGGCGG GCGCCTACGG ACTTGGTACG TGGGCTGGCG CACGGCTGGT CCACAGCAAA
GCCTTCATGC AGGAGCCACT GGTCAGGGCA ATGATCCCGT TCGAGTGTCT GTTCGAAACG
GATGTGGTGG CCTCAACGCC TCAAGCTACG AAGATTCTCG CGCTGCGGTC GCTCGACGTA
GACCCGGCAG CCATCGGTGG TAGCGCGGTG ATCTAG
 
Protein sequence
MSDFHDVSIN LLSALIGLTA GWARGAAANR LRYRHARGLW RQLAGPTVNI VVGAHSVTGW 
ETAGLMGIGD AFAVSELQQH LVSIGAGQPK IIYGGRLEAE TRRNDLILIG GPDTNSMTRE
VMKRLAGTFK FLDPPAHTFA IRDAHGGKTY DPDPPTNGEG TDFGVLVRAV NPFNPEASVL
IVAGAYGLGT WAGARLVHSK AFMQEPLVRA MIPFECLFET DVVASTPQAT KILALRSLDV
DPAAIGGSAV I