Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5077 |
Symbol | |
ID | 8336431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5833578 |
End bp | 5836607 |
Gene Length | 3030 bp |
Protein Length | 1009 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958176 |
Product | hypothetical protein |
Protein accession | YP_003115778 |
Protein GI | 256394214 |
COG category | [V] Defense mechanisms |
COG ID | [COG4257] Streptogramin lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.101156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.100954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAC CGAAGCGCTG GCGCAACCGT GTCCTGCACG TCGTCATGTG CGCTGCTCTG AGCCTGGCGG GGACTGCGGC GTCCACGTCC GCCGCGCGCG CCGACCCAGC GCCGCTGCCG ACGGTCGCCG ACCTCGGGGT CTTCTACGCC TCCTACGACT ACTCCTCCGC CTCCGGCGGT GGCGCCTCGG GGATCGCGCG CGGCGCCGAC GGGAACTTCT GGGCGGCGGT GACGCAGAAC GCGCAGACCT ACATCATCGT CTTCTCCCCG TCCTCCCACA CCATCGTGGC CCGCTACCCG GTCGACGGCG GCGTCTCCAC GATGGTCGCG GGTCCGGACG GCGAGGTCTG GTTCGCCGAA GACGGCGTCG GGACCGCCTC GACGCAGTCG GCGATCGCCG AGATCGACAC CTCCGGCACG ATCACGACGC ACCTGCTGCC GGCCTCCGAC GGACCGCGGG TCGGCAGCCT GACCTTCGAC GCGTCCGGCG ACGCGTGGTT CCTGGCGGAC GCGGGCGCTG ACAACGTGCG CGGCTACGTC GGCCACCTCG CGTCCGGCGG GTCGCTCACC CAGTTCGCGA TGCCGTACCA CTACGGCGCA GCGAGCGCCG ACCACGAACT GGCGATCGCT CCGGACGGCA GCGCCTGGTT CATCGGGAGC ATCGCCGGCG TGGTGCAGAT CGGGTCGCTC ACCCCGGCCG GGGCGTTCGC CTACCACGGC CTTCCGGCGG GTGCCGCGAA CACTCAGGAC CAGATCGTGC TCGGCCCGGA CGGCCGTCTG TGGTTCGACG CGGGGTTCGT GCCGCACAGC GACTTCATTT ACGAGGTCGG CGAGATCGAT CCGGCGACCG GCGCCCAGAC CCTGTACACG ATGCCGTCGG ACTTCGCCGG GGGATTCCTG AGCGTCGGCG CGGACGGCAT CATCTACGAC GCCGGCACCG TCGGCCCGCT CCACCACCAG TCCGGCACCG CCTTCGACAC CGCGGTCATG GCGATCTCGC CGACCGACGG CCGCGCCACC GAGTTCACCG GCCCGGACAC GTTCAGCCCG CAGGACATCG CCACCGACGC CGCGGGCAAC CTGTGGATGA ACCAGGGCGC CATGTTCGCC GAGGTGAGCC TCACCGCTGC GCACAGCACC GCGATGACGG TCGCGCCCGA TGTCAATCCC GCGTACTACG GCCAGCCCGG CGGCGTGACC GTGACCTTGA CGCCCACCGA GCCGGGCTCC CCGGCGCCGA CCGGGACGGT GACGTTCGCG GCGCGCCAGT TCGCTTCCGT CACCGAGCCG GTCGTCAACG GCACCGCGAC CCTCCCGATC ACCGACCTGC CGCTGGGCCT GACGTCTCTG TACGCCACCT ACAGCGGGGA CGCCGACTAC GGCCCGGAGA GCAGCGATCT GCTTCAGGAG ACGGTGAACG GCTCTCCGAC GACCCTGACC CTGGCGTCCG AGCTCAACCC GTCGAGGACT GACCAGAGCG TTCACGTCAC GGCGACGGTC GCGATGGCCG GCGGTTCGGC GCCCAAGTGC TGCTCGGTGC AGTTCACGGT GGACTCCGGC GCGCCGCAGG CGGTCGCGCT GACCGGTTCG ACAGCCGCCC TCGACCTGTC GTCGCTGAGC GTCGGCACTC ACACCATCAA GGCCGACTTC GTCAACCAGC CCGGCTATGG TCCCAGTACC AGCACCCTGA CTCAGACGGT CACCGCCGCC GACGCCTGTC CGTGCACCGT TTTCCCGGAC TCCGCGACGC CGGTCGTCCC CGACACCGGT GACGGATCAG CGGTCGAACT CGGCGTGAAG ATGCATGTCA GCACGGCGGG GAACGTCACC GGGATCCGCT TCTACAAGTC CGCGGCCAAC GCCGGGCCGC ACACCGGATC GCTGTGGGCT GCCAACGGCG CGCTGCTGGC GACCGGGACG TTCACCGGCG AGAGCGCGTC CGGCTGGCAG ACCCTCACGT TCGCCAATCC GGTCCCTGTC AGGCCGGGAG CCACCTACAC CGCCTCCTAC TACGCTCCGC ACGGTCACTA CTCGGCTGAC GGCGGCTTCT TCACCACCGG CGGCGCAGGC AGTGGGCTGA TCACCGCCTT GGCCGACGGT GCTTCCGGCG GCAACGGTGT GTACGCCTAC GGACCGGGCT CGCAGTTCCC GAGCGACAGC TACAACGCCA GCAACTACTG GGTCGACGCG CTGTTCGACA CCACCGGCGT CCCCACCGGA CCGCCGACCG TCACGGGGAC GACTCCGGTT GCCGCAGCCA CCGGCGTGGC CGACACCATC GCCCCGACCG CGACGTTCTC CGCCGCGCTC GATCCGACAA GTCTGGCCTA CACCCTCACC GACGCTGCCG GCGTCACGGT CCCGGCCGTC GCGTCCTACG ACGCCGCCAC CCGCACCGCG ACGCTGACCC CGACGACCCA GCTGCCGTCC GGCACCGTGT TCACCGCCTC GATCACCGCC ACCGACGCCT GGGGACACGC CATGACCCAG CCGACGACCT GGAGCTTCAC CACCGGGACC ACGCCTCCGG CGTACAACTG CCCCTGCACG CTCTTCGCTC CCGGCGACGC CCCGGCCGTG ACCAACTCAG GGGACTACAA CTCCGTAGAA CTCGGCGTGC GCTTCACCTC AGCAGTCAAC GGCACCGTCA CCGGCATCCA GTTCTACAAG GGCTCACTGA ACACCGGCAC CCACACCGGC TCACTCTGGA CCACCGACGG AACGCAACTC GCCACCGGCA CCTTCACCAA CGAGACCGCC TCAGGCTGGC AAACCCTCAC CTTCACCACC CCCATCGCGA TCACCGCCGG CACAACCTAC GTAGCCTCCT ACCACGCCCC CAACGGCAAC TACTCCTACA CCGCCAACTA CCTCGACTAC CCCCACACCG CCTACCCGCT CACCGCCCCG ACGGGCAGCG TGCCGCCGGG CAACGGAGTC TTCGCCTACG AATCGAGCGC CTCGTACCCG GTCGAGTTCA GCGACGGCAA CAACTACTGG GTCAGCCTCC TGTTCGCGCC GGGTAGCTAG
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Protein sequence | MRAPKRWRNR VLHVVMCAAL SLAGTAASTS AARADPAPLP TVADLGVFYA SYDYSSASGG GASGIARGAD GNFWAAVTQN AQTYIIVFSP SSHTIVARYP VDGGVSTMVA GPDGEVWFAE DGVGTASTQS AIAEIDTSGT ITTHLLPASD GPRVGSLTFD ASGDAWFLAD AGADNVRGYV GHLASGGSLT QFAMPYHYGA ASADHELAIA PDGSAWFIGS IAGVVQIGSL TPAGAFAYHG LPAGAANTQD QIVLGPDGRL WFDAGFVPHS DFIYEVGEID PATGAQTLYT MPSDFAGGFL SVGADGIIYD AGTVGPLHHQ SGTAFDTAVM AISPTDGRAT EFTGPDTFSP QDIATDAAGN LWMNQGAMFA EVSLTAAHST AMTVAPDVNP AYYGQPGGVT VTLTPTEPGS PAPTGTVTFA ARQFASVTEP VVNGTATLPI TDLPLGLTSL YATYSGDADY GPESSDLLQE TVNGSPTTLT LASELNPSRT DQSVHVTATV AMAGGSAPKC CSVQFTVDSG APQAVALTGS TAALDLSSLS VGTHTIKADF VNQPGYGPST STLTQTVTAA DACPCTVFPD SATPVVPDTG DGSAVELGVK MHVSTAGNVT GIRFYKSAAN AGPHTGSLWA ANGALLATGT FTGESASGWQ TLTFANPVPV RPGATYTASY YAPHGHYSAD GGFFTTGGAG SGLITALADG ASGGNGVYAY GPGSQFPSDS YNASNYWVDA LFDTTGVPTG PPTVTGTTPV AAATGVADTI APTATFSAAL DPTSLAYTLT DAAGVTVPAV ASYDAATRTA TLTPTTQLPS GTVFTASITA TDAWGHAMTQ PTTWSFTTGT TPPAYNCPCT LFAPGDAPAV TNSGDYNSVE LGVRFTSAVN GTVTGIQFYK GSLNTGTHTG SLWTTDGTQL ATGTFTNETA SGWQTLTFTT PIAITAGTTY VASYHAPNGN YSYTANYLDY PHTAYPLTAP TGSVPPGNGV FAYESSASYP VEFSDGNNYW VSLLFAPGS
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