Gene Caci_5077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5077 
Symbol 
ID8336431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5833578 
End bp5836607 
Gene Length3030 bp 
Protein Length1009 aa 
Translation table11 
GC content70% 
IMG OID644958176 
Producthypothetical protein 
Protein accessionYP_003115778 
Protein GI256394214 
COG category[V] Defense mechanisms 
COG ID[COG4257] Streptogramin lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.100954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAC CGAAGCGCTG GCGCAACCGT GTCCTGCACG TCGTCATGTG CGCTGCTCTG 
AGCCTGGCGG GGACTGCGGC GTCCACGTCC GCCGCGCGCG CCGACCCAGC GCCGCTGCCG
ACGGTCGCCG ACCTCGGGGT CTTCTACGCC TCCTACGACT ACTCCTCCGC CTCCGGCGGT
GGCGCCTCGG GGATCGCGCG CGGCGCCGAC GGGAACTTCT GGGCGGCGGT GACGCAGAAC
GCGCAGACCT ACATCATCGT CTTCTCCCCG TCCTCCCACA CCATCGTGGC CCGCTACCCG
GTCGACGGCG GCGTCTCCAC GATGGTCGCG GGTCCGGACG GCGAGGTCTG GTTCGCCGAA
GACGGCGTCG GGACCGCCTC GACGCAGTCG GCGATCGCCG AGATCGACAC CTCCGGCACG
ATCACGACGC ACCTGCTGCC GGCCTCCGAC GGACCGCGGG TCGGCAGCCT GACCTTCGAC
GCGTCCGGCG ACGCGTGGTT CCTGGCGGAC GCGGGCGCTG ACAACGTGCG CGGCTACGTC
GGCCACCTCG CGTCCGGCGG GTCGCTCACC CAGTTCGCGA TGCCGTACCA CTACGGCGCA
GCGAGCGCCG ACCACGAACT GGCGATCGCT CCGGACGGCA GCGCCTGGTT CATCGGGAGC
ATCGCCGGCG TGGTGCAGAT CGGGTCGCTC ACCCCGGCCG GGGCGTTCGC CTACCACGGC
CTTCCGGCGG GTGCCGCGAA CACTCAGGAC CAGATCGTGC TCGGCCCGGA CGGCCGTCTG
TGGTTCGACG CGGGGTTCGT GCCGCACAGC GACTTCATTT ACGAGGTCGG CGAGATCGAT
CCGGCGACCG GCGCCCAGAC CCTGTACACG ATGCCGTCGG ACTTCGCCGG GGGATTCCTG
AGCGTCGGCG CGGACGGCAT CATCTACGAC GCCGGCACCG TCGGCCCGCT CCACCACCAG
TCCGGCACCG CCTTCGACAC CGCGGTCATG GCGATCTCGC CGACCGACGG CCGCGCCACC
GAGTTCACCG GCCCGGACAC GTTCAGCCCG CAGGACATCG CCACCGACGC CGCGGGCAAC
CTGTGGATGA ACCAGGGCGC CATGTTCGCC GAGGTGAGCC TCACCGCTGC GCACAGCACC
GCGATGACGG TCGCGCCCGA TGTCAATCCC GCGTACTACG GCCAGCCCGG CGGCGTGACC
GTGACCTTGA CGCCCACCGA GCCGGGCTCC CCGGCGCCGA CCGGGACGGT GACGTTCGCG
GCGCGCCAGT TCGCTTCCGT CACCGAGCCG GTCGTCAACG GCACCGCGAC CCTCCCGATC
ACCGACCTGC CGCTGGGCCT GACGTCTCTG TACGCCACCT ACAGCGGGGA CGCCGACTAC
GGCCCGGAGA GCAGCGATCT GCTTCAGGAG ACGGTGAACG GCTCTCCGAC GACCCTGACC
CTGGCGTCCG AGCTCAACCC GTCGAGGACT GACCAGAGCG TTCACGTCAC GGCGACGGTC
GCGATGGCCG GCGGTTCGGC GCCCAAGTGC TGCTCGGTGC AGTTCACGGT GGACTCCGGC
GCGCCGCAGG CGGTCGCGCT GACCGGTTCG ACAGCCGCCC TCGACCTGTC GTCGCTGAGC
GTCGGCACTC ACACCATCAA GGCCGACTTC GTCAACCAGC CCGGCTATGG TCCCAGTACC
AGCACCCTGA CTCAGACGGT CACCGCCGCC GACGCCTGTC CGTGCACCGT TTTCCCGGAC
TCCGCGACGC CGGTCGTCCC CGACACCGGT GACGGATCAG CGGTCGAACT CGGCGTGAAG
ATGCATGTCA GCACGGCGGG GAACGTCACC GGGATCCGCT TCTACAAGTC CGCGGCCAAC
GCCGGGCCGC ACACCGGATC GCTGTGGGCT GCCAACGGCG CGCTGCTGGC GACCGGGACG
TTCACCGGCG AGAGCGCGTC CGGCTGGCAG ACCCTCACGT TCGCCAATCC GGTCCCTGTC
AGGCCGGGAG CCACCTACAC CGCCTCCTAC TACGCTCCGC ACGGTCACTA CTCGGCTGAC
GGCGGCTTCT TCACCACCGG CGGCGCAGGC AGTGGGCTGA TCACCGCCTT GGCCGACGGT
GCTTCCGGCG GCAACGGTGT GTACGCCTAC GGACCGGGCT CGCAGTTCCC GAGCGACAGC
TACAACGCCA GCAACTACTG GGTCGACGCG CTGTTCGACA CCACCGGCGT CCCCACCGGA
CCGCCGACCG TCACGGGGAC GACTCCGGTT GCCGCAGCCA CCGGCGTGGC CGACACCATC
GCCCCGACCG CGACGTTCTC CGCCGCGCTC GATCCGACAA GTCTGGCCTA CACCCTCACC
GACGCTGCCG GCGTCACGGT CCCGGCCGTC GCGTCCTACG ACGCCGCCAC CCGCACCGCG
ACGCTGACCC CGACGACCCA GCTGCCGTCC GGCACCGTGT TCACCGCCTC GATCACCGCC
ACCGACGCCT GGGGACACGC CATGACCCAG CCGACGACCT GGAGCTTCAC CACCGGGACC
ACGCCTCCGG CGTACAACTG CCCCTGCACG CTCTTCGCTC CCGGCGACGC CCCGGCCGTG
ACCAACTCAG GGGACTACAA CTCCGTAGAA CTCGGCGTGC GCTTCACCTC AGCAGTCAAC
GGCACCGTCA CCGGCATCCA GTTCTACAAG GGCTCACTGA ACACCGGCAC CCACACCGGC
TCACTCTGGA CCACCGACGG AACGCAACTC GCCACCGGCA CCTTCACCAA CGAGACCGCC
TCAGGCTGGC AAACCCTCAC CTTCACCACC CCCATCGCGA TCACCGCCGG CACAACCTAC
GTAGCCTCCT ACCACGCCCC CAACGGCAAC TACTCCTACA CCGCCAACTA CCTCGACTAC
CCCCACACCG CCTACCCGCT CACCGCCCCG ACGGGCAGCG TGCCGCCGGG CAACGGAGTC
TTCGCCTACG AATCGAGCGC CTCGTACCCG GTCGAGTTCA GCGACGGCAA CAACTACTGG
GTCAGCCTCC TGTTCGCGCC GGGTAGCTAG
 
Protein sequence
MRAPKRWRNR VLHVVMCAAL SLAGTAASTS AARADPAPLP TVADLGVFYA SYDYSSASGG 
GASGIARGAD GNFWAAVTQN AQTYIIVFSP SSHTIVARYP VDGGVSTMVA GPDGEVWFAE
DGVGTASTQS AIAEIDTSGT ITTHLLPASD GPRVGSLTFD ASGDAWFLAD AGADNVRGYV
GHLASGGSLT QFAMPYHYGA ASADHELAIA PDGSAWFIGS IAGVVQIGSL TPAGAFAYHG
LPAGAANTQD QIVLGPDGRL WFDAGFVPHS DFIYEVGEID PATGAQTLYT MPSDFAGGFL
SVGADGIIYD AGTVGPLHHQ SGTAFDTAVM AISPTDGRAT EFTGPDTFSP QDIATDAAGN
LWMNQGAMFA EVSLTAAHST AMTVAPDVNP AYYGQPGGVT VTLTPTEPGS PAPTGTVTFA
ARQFASVTEP VVNGTATLPI TDLPLGLTSL YATYSGDADY GPESSDLLQE TVNGSPTTLT
LASELNPSRT DQSVHVTATV AMAGGSAPKC CSVQFTVDSG APQAVALTGS TAALDLSSLS
VGTHTIKADF VNQPGYGPST STLTQTVTAA DACPCTVFPD SATPVVPDTG DGSAVELGVK
MHVSTAGNVT GIRFYKSAAN AGPHTGSLWA ANGALLATGT FTGESASGWQ TLTFANPVPV
RPGATYTASY YAPHGHYSAD GGFFTTGGAG SGLITALADG ASGGNGVYAY GPGSQFPSDS
YNASNYWVDA LFDTTGVPTG PPTVTGTTPV AAATGVADTI APTATFSAAL DPTSLAYTLT
DAAGVTVPAV ASYDAATRTA TLTPTTQLPS GTVFTASITA TDAWGHAMTQ PTTWSFTTGT
TPPAYNCPCT LFAPGDAPAV TNSGDYNSVE LGVRFTSAVN GTVTGIQFYK GSLNTGTHTG
SLWTTDGTQL ATGTFTNETA SGWQTLTFTT PIAITAGTTY VASYHAPNGN YSYTANYLDY
PHTAYPLTAP TGSVPPGNGV FAYESSASYP VEFSDGNNYW VSLLFAPGS