Gene Caci_5060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5060 
Symbol 
ID8336414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5807513 
End bp5808457 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content69% 
IMG OID644958159 
Productalpha/beta hydrolase fold protein-3 domain protein 
Protein accessionYP_003115761 
Protein GI256394197 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC CAGTGCTTGA GCCGGCTGCC CAACGGTTGG TCGAGGAGAC CGATCCGCAC 
CCGCACGTCT ACGAGGTGCC TTTGGAGCAG GCCAGGGCCC GTTTGCGTCA GTTGCAGGCC
GGCGACGGAG TGCCAAAGCC TGAGATCGAC GAGGAGTGGG TCGAGGTCGA TGCGGGCGCC
TGGGGGATGG TTCGGGCTCG GATCGTGCGA CCTCAAGGCG CGGCCGGGAT GTTGCCCGTC
TTCCTGTATC TCCACGGCGG CGGCTGGGTG GTCGGCGACA GCGACACGCA CGATCGCCTG
GTGCGGGAGC TGGTCGTCGG CTCCGGCGCG GCGGCGGTGT TCCCGCTCTA CGACCGGGCG
CCCGAGGCGA AGTACCCGAC GCAGATCGAG CAGAGCTACG CCGTCGTGCG GTGGGCTGTG
CGCGAGGGCG CGCGGCATGG GCTGGACGCC GCCCGACTCG CAGTGTGCGG CGACTCCTCC
GGCGGAGGCA TGGCAGCGGC GCTCGCCCTG ATGGCCAAGG AGCGCGGCGA CGTGCATATC
AAGGCCCAGA TGCTGCTCTA CCCGACGCTG GACGCGAACT TCGAGACCAG CTCATACCAG
CAGTTCGCAG ACCACTACTA CAACACGCGC GCCGCCATGC AGTGGTTCTG GGATCAGTAC
ACCGCCGACC CCGCGCAGCG CACCGAGCCG CACGCCTCCC CGCTGCGAGC CACCCTCGAA
GACCTGCGCG GCATGCCGCC GACCCTACTG ATCACCGGCG AGGCCGACGT CCTGCGCGAC
GAGGGCGAGG CCTACGCCGC CAAGCTGCGC GAGGCCGAAG CGGACGTCAC CGCACTGCGA
ATCCTCGGCA CAGTGCACGA CTTCCTCCTG CTCGACAGCC TCCGCGACAC CAACGCCGCC
AAGCTCGGCC GCCTCCTGGT GATCGAGGCA CTGAAGGCGA CCTGA
 
Protein sequence
MLDPVLEPAA QRLVEETDPH PHVYEVPLEQ ARARLRQLQA GDGVPKPEID EEWVEVDAGA 
WGMVRARIVR PQGAAGMLPV FLYLHGGGWV VGDSDTHDRL VRELVVGSGA AAVFPLYDRA
PEAKYPTQIE QSYAVVRWAV REGARHGLDA ARLAVCGDSS GGGMAAALAL MAKERGDVHI
KAQMLLYPTL DANFETSSYQ QFADHYYNTR AAMQWFWDQY TADPAQRTEP HASPLRATLE
DLRGMPPTLL ITGEADVLRD EGEAYAAKLR EAEADVTALR ILGTVHDFLL LDSLRDTNAA
KLGRLLVIEA LKAT