Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5059 |
Symbol | |
ID | 8336413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5806490 |
End bp | 5807161 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958158 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003115760 |
Protein GI | 256394196 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCTCA ATACCGAACT GCGCGCGTAC TACGAAGCCC GCCAGCAGCA GATCCCGGCG GACATCCGCG CGGTCATGGA CCGCGCGGCA GCCGACCTCG CCGCGTCCGG CCAGACCGAG CAAGCGCCGG CCGTGGGCGA GGCCGCCCCG CTGTTCACGC TCCCGGCCGT CGACGGCCGC AGCGTCGCCC TGGCCGACGC TCTCGCGCAG GGCCCTGTGG TGCTCACCTT CTACCGCGGC GCCTGGTGCC CCTACTGCAA CATGACCCTG CGCGCCCTCC AAGCCGTCAA CGACGACATC ACCGCACGCG GCGCACAACT GATCGCGGTG TCCCCGCAGA TCCCCGACGA GTCCCTCACC CTCGCCGAAA AGCACGCCCT GACCTTCCAG ATCCTCAGCG ACCTCGGCTG CCAGACCGCC AAGCTCTACG GCCTGTCCTT CGACATCCCG CAGGACCTCT CCAACCTCTA CGACGCCCTC GGCTTCGACC TGAACCGCGT CAACGCCGGC CACGCCCGCA CCCTCCCCCT CCCCTCCACC TTCGTCATCG CCCCCGACGG CACCATCACC TGGACCTTCG TCGAAACCGA CTACACCAAG CGCGCCGAAC CCTCCGACAT CCTCGCCGCC CTGGACCGCA TCCGCGATAC CGCGGCGGCG TCAGCGAGCT GA
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Protein sequence | MSLNTELRAY YEARQQQIPA DIRAVMDRAA ADLAASGQTE QAPAVGEAAP LFTLPAVDGR SVALADALAQ GPVVLTFYRG AWCPYCNMTL RALQAVNDDI TARGAQLIAV SPQIPDESLT LAEKHALTFQ ILSDLGCQTA KLYGLSFDIP QDLSNLYDAL GFDLNRVNAG HARTLPLPST FVIAPDGTIT WTFVETDYTK RAEPSDILAA LDRIRDTAAA SAS
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