Gene Caci_5059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5059 
Symbol 
ID8336413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5806490 
End bp5807161 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID644958158 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003115760 
Protein GI256394196 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCTCA ATACCGAACT GCGCGCGTAC TACGAAGCCC GCCAGCAGCA GATCCCGGCG 
GACATCCGCG CGGTCATGGA CCGCGCGGCA GCCGACCTCG CCGCGTCCGG CCAGACCGAG
CAAGCGCCGG CCGTGGGCGA GGCCGCCCCG CTGTTCACGC TCCCGGCCGT CGACGGCCGC
AGCGTCGCCC TGGCCGACGC TCTCGCGCAG GGCCCTGTGG TGCTCACCTT CTACCGCGGC
GCCTGGTGCC CCTACTGCAA CATGACCCTG CGCGCCCTCC AAGCCGTCAA CGACGACATC
ACCGCACGCG GCGCACAACT GATCGCGGTG TCCCCGCAGA TCCCCGACGA GTCCCTCACC
CTCGCCGAAA AGCACGCCCT GACCTTCCAG ATCCTCAGCG ACCTCGGCTG CCAGACCGCC
AAGCTCTACG GCCTGTCCTT CGACATCCCG CAGGACCTCT CCAACCTCTA CGACGCCCTC
GGCTTCGACC TGAACCGCGT CAACGCCGGC CACGCCCGCA CCCTCCCCCT CCCCTCCACC
TTCGTCATCG CCCCCGACGG CACCATCACC TGGACCTTCG TCGAAACCGA CTACACCAAG
CGCGCCGAAC CCTCCGACAT CCTCGCCGCC CTGGACCGCA TCCGCGATAC CGCGGCGGCG
TCAGCGAGCT GA
 
Protein sequence
MSLNTELRAY YEARQQQIPA DIRAVMDRAA ADLAASGQTE QAPAVGEAAP LFTLPAVDGR 
SVALADALAQ GPVVLTFYRG AWCPYCNMTL RALQAVNDDI TARGAQLIAV SPQIPDESLT
LAEKHALTFQ ILSDLGCQTA KLYGLSFDIP QDLSNLYDAL GFDLNRVNAG HARTLPLPST
FVIAPDGTIT WTFVETDYTK RAEPSDILAA LDRIRDTAAA SAS