| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5053 |
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| Symbol | |
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| ID | 8336407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5801379 |
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| End bp | 5802311 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958152 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003115754 |
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| Protein GI | 256394190 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.983736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCG ATCGTGGGGT GGACCAGCGT TGGGTGAATC AGACCCGAAG CACCGCCCAG
GCTCCCTTCT CCGCACCGGG GAACCCGACC ATCCCCCGGA TTCTGCTCGG CGCCGAGCTG
CGCCGACTGC GCAATGCGGC AGGACTCAGC AGAGCCAAGG CGGGGTATGC GATCCGCGGC
TCCGAATCCA AAATCAGCCG CATGGAGTTG GGGCGGATCA GCTTCAAACC ACGCGATGTG
GCCGACCTGC TCACCCTTTA CGGCGTCCGG GACGCCCCCG AGCGCGGCAT GCTTTTGGCG
CTCATGGAAC AGGCGAACGC CGACAGCTGG TGGCACTCCT TCGCCGACGT CGTCCCCGCC
TGGTTCGAGG CCTACCTCGG TTTGGAGGAC GCAGCCTCGG TCATCCGCTG CTACCAGACC
CGCCTGGTCC CCGACCTGTT GCAGACCGAG GATTACGCAC GCTCCGTCAT CCGGTTGGGG
AATCCGCAGG CTGATCCCGT CGAGATCGAA CGGCGCGTGG CTTTGCGCAT GAACCGGGCC
CGCTTGCTGC GACGTCCGCA CCCGCCCAAG ATCTGGGCCG TGATCGACGA GTCCGCCTTG
TGTCGTCCGC CGAGCGGCCA CGATGAGAAG ACGCTCGCTC AGATCGAGTA TCTCCGGGAG
CTGTCACGGC TGCCGCACGT CACCATCCAG GTCGTGCGGT CCGAACGCGG CACGCGATGC
GCCGACGTCG GCGCCGTCCC GTTCACCATC CTGCGCTTCC CGGAGGCGGC GCTGCCGGAC
ATCGTCTATC TGGAGCACCT CACCGGCGCC AGCTACCTGG ACAAGGCCGA TGACCTGGAT
GTGTATGCCA CAGTGATGGA CCAGCTGTGC CTGGACGCGG TCCCCGCCGC CGACAGCGTC
GGATTCTTCA CCGACGTCAT CAACGGGCTG TGA
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| Protein sequence | MPADRGVDQR WVNQTRSTAQ APFSAPGNPT IPRILLGAEL RRLRNAAGLS RAKAGYAIRG
SESKISRMEL GRISFKPRDV ADLLTLYGVR DAPERGMLLA LMEQANADSW WHSFADVVPA
WFEAYLGLED AASVIRCYQT RLVPDLLQTE DYARSVIRLG NPQADPVEIE RRVALRMNRA
RLLRRPHPPK IWAVIDESAL CRPPSGHDEK TLAQIEYLRE LSRLPHVTIQ VVRSERGTRC
ADVGAVPFTI LRFPEAALPD IVYLEHLTGA SYLDKADDLD VYATVMDQLC LDAVPAADSV
GFFTDVINGL
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