| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5034 |
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| Symbol | |
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| ID | 8336388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5770936 |
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| End bp | 5773743 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958133 |
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| Product | ATP-dependent transcriptional regulator, MalT- like, LuxR family |
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| Protein accession | YP_003115735 |
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| Protein GI | 256394171 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.314145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGATCA CAGCTGCGAC GTCTGCACGG AACGCCGCGC GTTACCCCAC GGAGCGCCCC
AACCGTCTCC CCCTGATCGC CCGGGACGGT CTGGTTGCGG AATTGGACCA GGCCGCGGCC
GGCAAGGTGA CGGTCATCAC CGCACCCGCC GGCAGCGGGA AGTCCTCATT GCTGCGGGCG
TGGGCCGACC GGCAGGACCG GCAGCACCGG CTGGCGATCG TCCAGGTCCC CCGCGACCAG
CCCGACGGCC AGCTGTTCTG GCTCTCGCTG CTGACCACGG TGCGCCGCCT GAGCGGCGAG
CCGATCGCCG CCGATCCGCC CGCCGCCGCG CCGGAGTTCA GCGCCGCGAC CGCCGTCGAG
CGCATCCTGG AGAAGCTGGC GGAGATCCCC GAGCGTGTCA GCCTGCTGAT CGACGACGTC
CACGAACTGA CGGCGCCGGA GACCTTCGCC GATCTCACCC GGCTGCTCGC CGACCTGCCC
GACCACGTCT CGGTGATCCT GGCCACCCGG CGGAACCTGC CGCTGCGGCT GCACCGCCTG
CGCCTGACCG GGCAGCTGAC CGACCTGCGC GCGGCCGATC TGCGCTTCAG CGAGGACGAG
ACCCGCGCGC TGCTGGCGGC GTCGGGGATC ACGCTGTCGG ACGCCGGCGT GGCCCGGCTC
CTGGAGCGCA CCGAGGGCTG GGCCGCCGGG CTGCGGCTGG CGGTGCTGTC CCTGACCGGG
CACCCCGATC CGGAGCGGTT CGTCGCCGAG TTCGGCGGGA GCAACCGCAC GGTCGCGGAG
TACTTGCTCG CGGAGATGCT GGAGCGGCAG CCGCAGGATA TCCAGGACCT GCTGCTGCGC
ACCTCGATCC TGACCCGGAT CAGCGGGGAG CTCGCCGACG CGCTCACCGG CCGCGTCGGC
TCCGAGCCGA TCCTGCTCGA CCTGGAGGAC GCCAACGCCT TCGTGGTCTC CCTGGACGCC
GAGCGCACCT GGTTCCGCTA CCACCACCTG TTCGCCGACC TGCTGCAGCT GGAGCTGCGC
CGAGTCCACC CCGACGAGGG GCGCGGGCTG CACCGCCGGG CCGCGGACTG GTTCGCCGAA
GCCGGGATGA CCGTCGAGGC CATCCGGCAC ACCCAGGCTG CCGGCGACTG GTCCGCCGCG
GCGAACCTGT TCTCCCACCA CGCGTTCGGC ATGATGCTCG ACGGCCAACT GGAGACCATG
CAGTCGCTGC TGGAGGCGTT CCCGACCGGT CCGGCGGCCG ACCTGCCGGC GCTGAGCGTG
GTCCGCGCGA TGGTCGACGT CTGGCACGGC CGCCTGGACG AGGCCGCCGC GCACCTGGCG
GCGGCCAAGG CCGGGCCGGA CCCGGCGCCG CCCTCGGCGC GCGCCGAGGC TCAGATCAGC
GCGCTGGAGC TGGTGCTGGC GCGGCGCCGG GGCGACGTCG ACACGGTGCT GCGGCTGGCT
CGCGTGCTCG CCGTCTCGAC CACTTCCGCT TATGCCTGCC CGCCCGCGTC TGCCTGCGCC
TTAGCCGTCG AAGCCGGTTC TGACTCCGAG TCCGAGTCCG AGTCCGGATC TGACTCGGTC
TCGACGCCTA CCTCTACCTC CGCCGCCGTC TCCGCTGACG AGCTCGCGCT GGGCGCCGAC
CTGCGGGTGC TGGTCCTGAT GAACCTCGGC ATCGTCGAGG CCTGGGCCGG CGGACTCGCC
GACGGCGCCA CGTACCTGAC GCACGCCGTC GAGCTGGCCC GCGTGATCGG GCGGCCGTAT
CTGGAGGTGA CCTGTCTGGC CCAGCTCGCG TTCGCCACCA AGCTGCACAG CTTCGCCGAG
ACCCGGCGCG TGTGCGAGCA GGCGGTCGCG CTGGCGGCGC GGCACGGCTG GGACACCGCC
CCGGTCCTAG CGCCGGCGCT GGTCACCCTG GCGTGCCTGC AGGTGTTCAC CGGCGAGTTC
GAGCACGGTC AGGACACCAT CGACCGTGCG GAGGAAGCGC TGCTCCTGGA CGCCGGAGCC
GACATCGGGC TGTTGCACCG GACCACCAAG GGGATGCTGC ACGCCACTCA AGGCCGCCTG
GCCGAAGCCG AGGCCGAGTT CGCCGCCGCC TACGACCTGC AGTCGCAGAT GCGGTACCCG
CACGCGCTGA GCGGTTACGT CGCGGGCTGG TTGGCCGCCG CCAAGGCGCG GCGCGGGTCG
ACGGACGCCG CGCGCGCCGT CATCGACAAG CTCGATGCCA CGCTGTTCGA CTCCGGGGAG
ATCCGCAACG CCCGCGCGGT GATCGCGCTT CGAGAGGGGG ACGTGGCGGG GGCGCTGGAC
GTCGTCACAC CGGTCACCAA CGGCTCCGCC AGCGCGGTCC ACGCGACCAC CCTGGTCGAG
GCGAACGCGC TGGAGGCGCT CGCATATCAC CGGAGCGGCA TTCCGGCGTC CGCAGCCAGG
GCTCAGGAGG CTGTCGAACG CGCCCTCGCC GCCGCCGAGC CCGAACGGCT GATCCTGCCG
CTGGTCATGG TCGGCGCGGG CGAGGTGCTC GAGACGGTGC CACGGCAGCG ATCGGCGCAC
GCCTCGCTGC TCACGGACAT CCTCGACATC ATCCACGGAT CAGCACCGGC GGCGACGGCT
TCGGACCAGC CGGCAGTCCC GGAGCTCAGT CCCACGGAAC TACGGATCCT GCGTTACCTC
CCCACCAACA TGTCCCGCCC CCAGATCGCC GGCGAGCTGT CGGTATCGGT GAACACGATC
TCCACACACG TCCGCAGCAT CTACGCCAAG CTCCAGGCGA CCGACCGCGC CTCAGCCGTA
CAGCGAGCAC GGGAGCTCCG ACTGCTGGCC GCCGGACCCT CGCGCTAG
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| Protein sequence | MPITAATSAR NAARYPTERP NRLPLIARDG LVAELDQAAA GKVTVITAPA GSGKSSLLRA
WADRQDRQHR LAIVQVPRDQ PDGQLFWLSL LTTVRRLSGE PIAADPPAAA PEFSAATAVE
RILEKLAEIP ERVSLLIDDV HELTAPETFA DLTRLLADLP DHVSVILATR RNLPLRLHRL
RLTGQLTDLR AADLRFSEDE TRALLAASGI TLSDAGVARL LERTEGWAAG LRLAVLSLTG
HPDPERFVAE FGGSNRTVAE YLLAEMLERQ PQDIQDLLLR TSILTRISGE LADALTGRVG
SEPILLDLED ANAFVVSLDA ERTWFRYHHL FADLLQLELR RVHPDEGRGL HRRAADWFAE
AGMTVEAIRH TQAAGDWSAA ANLFSHHAFG MMLDGQLETM QSLLEAFPTG PAADLPALSV
VRAMVDVWHG RLDEAAAHLA AAKAGPDPAP PSARAEAQIS ALELVLARRR GDVDTVLRLA
RVLAVSTTSA YACPPASACA LAVEAGSDSE SESESGSDSV STPTSTSAAV SADELALGAD
LRVLVLMNLG IVEAWAGGLA DGATYLTHAV ELARVIGRPY LEVTCLAQLA FATKLHSFAE
TRRVCEQAVA LAARHGWDTA PVLAPALVTL ACLQVFTGEF EHGQDTIDRA EEALLLDAGA
DIGLLHRTTK GMLHATQGRL AEAEAEFAAA YDLQSQMRYP HALSGYVAGW LAAAKARRGS
TDAARAVIDK LDATLFDSGE IRNARAVIAL REGDVAGALD VVTPVTNGSA SAVHATTLVE
ANALEALAYH RSGIPASAAR AQEAVERALA AAEPERLILP LVMVGAGEVL ETVPRQRSAH
ASLLTDILDI IHGSAPAATA SDQPAVPELS PTELRILRYL PTNMSRPQIA GELSVSVNTI
STHVRSIYAK LQATDRASAV QRARELRLLA AGPSR
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