Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5016 |
Symbol | |
ID | 8336370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5743445 |
End bp | 5744410 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958115 |
Product | PfkB domain protein |
Protein accession | YP_003115717 |
Protein GI | 256394153 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.816187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGC CGAGCTGCCT GGACGTCCTC ACCATCGGCG AGACCATGGC CGCATTGCGC GCCGACGGAG CCATCCGTCT GGGCTCGGCG ATGACACTGT CGCCGGCGGG CGCCGAATCC ACCGTCGCGA TCGGACTGGC GCGCCTGGGT CATCGGGCCG GCTGGGTGGG CCGGGTCGGC GCTGACGAGT TCGGCGAACT GATTCTGCGC ACCCTTCGGG CCGAAGGCGT CGATCTGACC CACGCGCGCG TGGATCCGGA CGGCCGCCCG ACCGGGGTGA TGGCCCGCGA GCACCGTGTC GGCAGCCTGA TCCGCGTGAG CTACCACCGG AGCGGCTCGG CCGGGTCAGC GCTCGAACCC GGCGACGTAT TGCCCGCCTT GGAAGGCGGC GCGCGCATTC TGCACCTGAC CGGCATCACC CCGGCGCTCA GCCCGAGTGC TGCCGAAGCG GTGCGAGCCG CCGCCCGACG CGCCCGCGAG CTCGGCGTGA GGGTCAGCTT CGACGTCAAC TACCGCTCCC GGCTGTGGTC GCCCGAACGT GCCCGCGACG TGCTGCTCCC GCTGGCCGAA CTCGCCGACG TCCTCATCGC CTCCAGCGAC GAGCTGCACC TGGTATCTCC GAATCCCGCC TCCGACGAGG CCGGCGCAGC CGCCGCGATC CTGGCGCGTG GGACGCGTGA GGTCGTCCTC ACCCGAGGCG GCGACGGAGC CAGCGTGATC ACGGCCGAGG GCACGATGTC AGTACCCGTA CGCCTGGTAC CGGTCGTCGA CGTCGTCGGC GCCGGTGACG CCTTCGTCGC CGGCTACCTC TCTGCCCTGC TGGACGACCT GCCCGTCGAA GATCGCCTGC ATCGCGCTGC CACCACCGGC GCCTTCGCCG TCGCCACCGC CGGCGACTGG GAAGGCCTGC CCACGCGCGC CGACCTCGCG CTGCTCGACG AGCCCTCGGG GAGCACAGTT CGGTAG
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Protein sequence | MTAPSCLDVL TIGETMAALR ADGAIRLGSA MTLSPAGAES TVAIGLARLG HRAGWVGRVG ADEFGELILR TLRAEGVDLT HARVDPDGRP TGVMAREHRV GSLIRVSYHR SGSAGSALEP GDVLPALEGG ARILHLTGIT PALSPSAAEA VRAAARRARE LGVRVSFDVN YRSRLWSPER ARDVLLPLAE LADVLIASSD ELHLVSPNPA SDEAGAAAAI LARGTREVVL TRGGDGASVI TAEGTMSVPV RLVPVVDVVG AGDAFVAGYL SALLDDLPVE DRLHRAATTG AFAVATAGDW EGLPTRADLA LLDEPSGSTV R
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