Gene Caci_5016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5016 
Symbol 
ID8336370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5743445 
End bp5744410 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content72% 
IMG OID644958115 
ProductPfkB domain protein 
Protein accessionYP_003115717 
Protein GI256394153 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.816187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC CGAGCTGCCT GGACGTCCTC ACCATCGGCG AGACCATGGC CGCATTGCGC 
GCCGACGGAG CCATCCGTCT GGGCTCGGCG ATGACACTGT CGCCGGCGGG CGCCGAATCC
ACCGTCGCGA TCGGACTGGC GCGCCTGGGT CATCGGGCCG GCTGGGTGGG CCGGGTCGGC
GCTGACGAGT TCGGCGAACT GATTCTGCGC ACCCTTCGGG CCGAAGGCGT CGATCTGACC
CACGCGCGCG TGGATCCGGA CGGCCGCCCG ACCGGGGTGA TGGCCCGCGA GCACCGTGTC
GGCAGCCTGA TCCGCGTGAG CTACCACCGG AGCGGCTCGG CCGGGTCAGC GCTCGAACCC
GGCGACGTAT TGCCCGCCTT GGAAGGCGGC GCGCGCATTC TGCACCTGAC CGGCATCACC
CCGGCGCTCA GCCCGAGTGC TGCCGAAGCG GTGCGAGCCG CCGCCCGACG CGCCCGCGAG
CTCGGCGTGA GGGTCAGCTT CGACGTCAAC TACCGCTCCC GGCTGTGGTC GCCCGAACGT
GCCCGCGACG TGCTGCTCCC GCTGGCCGAA CTCGCCGACG TCCTCATCGC CTCCAGCGAC
GAGCTGCACC TGGTATCTCC GAATCCCGCC TCCGACGAGG CCGGCGCAGC CGCCGCGATC
CTGGCGCGTG GGACGCGTGA GGTCGTCCTC ACCCGAGGCG GCGACGGAGC CAGCGTGATC
ACGGCCGAGG GCACGATGTC AGTACCCGTA CGCCTGGTAC CGGTCGTCGA CGTCGTCGGC
GCCGGTGACG CCTTCGTCGC CGGCTACCTC TCTGCCCTGC TGGACGACCT GCCCGTCGAA
GATCGCCTGC ATCGCGCTGC CACCACCGGC GCCTTCGCCG TCGCCACCGC CGGCGACTGG
GAAGGCCTGC CCACGCGCGC CGACCTCGCG CTGCTCGACG AGCCCTCGGG GAGCACAGTT
CGGTAG
 
Protein sequence
MTAPSCLDVL TIGETMAALR ADGAIRLGSA MTLSPAGAES TVAIGLARLG HRAGWVGRVG 
ADEFGELILR TLRAEGVDLT HARVDPDGRP TGVMAREHRV GSLIRVSYHR SGSAGSALEP
GDVLPALEGG ARILHLTGIT PALSPSAAEA VRAAARRARE LGVRVSFDVN YRSRLWSPER
ARDVLLPLAE LADVLIASSD ELHLVSPNPA SDEAGAAAAI LARGTREVVL TRGGDGASVI
TAEGTMSVPV RLVPVVDVVG AGDAFVAGYL SALLDDLPVE DRLHRAATTG AFAVATAGDW
EGLPTRADLA LLDEPSGSTV R