| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5015 |
|---|
| Symbol | |
|---|
| ID | 8336369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5742813 |
|---|
| End bp | 5743448 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644958114 |
|---|
| Product | KDPG and KHG aldolase |
|---|
| Protein accession | YP_003115716 |
|---|
| Protein GI | 256394152 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.389696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTGA CCGACATCCC CTTCCGGACC CTGGCGATCG TGCGGGGCAC CGACCGCGAC
GCCGCACTGC GTACCGTCCT GGTGCTGGCC GAGGAGGGTC TGACCACCGT CGAGGTGTCG
CTGACCACGC CCGGCGCGCT GTGGGTGATC GAGCAGGCGC GGCGCGAACT CGGGCCCGAG
GCCGGGCTCG GCGCCGGGAC CGTGGTCACC GCCGACGACG CGATCCGGGC CGTCGAAGCG
GGCGCCGGCT TCCTGGTGAC GCCCGGTCTG GGCGCCGCCT TGCGGGAAGC GCCGACGACC
GGGCTCCCGA TGTTCGTCGG CGCCTCGACG CCCAGCGAGG TCATCGACGC CGACGCGTAC
GGCGCCACCG CGGTGAAGCT CTTCCCCGCC TCGCACGGCG GACCGCGGTA TCTCAAAGCT
CTGCGGGACC CGTTCCCGAC CATCGCGTTC GTCCCGGTCG GCGGTGTCGA TCGCGAAGCG
GCGCCGGCGT TCCTGGCCGC CGGCGCGGTC GCCGTCGGCG TCGGATCGCC GCTGATCGGC
GACGCGGCGA AGGGCGGCGA CCTGGCGGCG CTGCGACAGC GCGCGGCGGA CTGGCGTGCG
GTGATGACCG AGGCGATCGG GGCGGTCAGC GCATGA
|
|---|
| Protein sequence | MNLTDIPFRT LAIVRGTDRD AALRTVLVLA EEGLTTVEVS LTTPGALWVI EQARRELGPE
AGLGAGTVVT ADDAIRAVEA GAGFLVTPGL GAALREAPTT GLPMFVGAST PSEVIDADAY
GATAVKLFPA SHGGPRYLKA LRDPFPTIAF VPVGGVDREA APAFLAAGAV AVGVGSPLIG
DAAKGGDLAA LRQRAADWRA VMTEAIGAVS A
|
|---|
| |