Gene Caci_5014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5014 
Symbol 
ID8336368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5741943 
End bp5742800 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content70% 
IMG OID644958113 
Producthypothetical protein 
Protein accessionYP_003115715 
Protein GI256394151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.15636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGGC GGCTGCCCTT GGACGTCCGC ACCGATCTCG TCCATGGCGG ACGCTGGACG 
TCGCTGCGGG GCGCAGACCG CGAGTGGCTG TGGCAGAACC CTGATGCTGC TGGTCGTTCC
TCGGTGCTGC CCGGGCAGTC CTTCGTCGAC GCCGGCGGGC TGGAGGAGTG TGTGCCGACG
GTCCGGGGTA CGCCGGACCA CGGCGATGCC TGGTCCCGGC CGTGGCGGTC GAACGGCGGC
ACCGAGGTAT GCCAGAGTCC TGATTTTGTC CTGACCAGGC GCATCGAAGC AGACGGGGAT
TCGCTGCGGG TCCACTACGT TCTGCGGGCC GAGCCGGGAT ACCGGTTCCT GTGGGCGGCG
CACGCGTTGC TGGATGTCTC GGAGCAGGCT GTGCTCCGTG CTTCTGACAG CACTGCGACC
AGGGTGTATC CGGACGCGGG AGCTCGCTAC GCTGAGGGTC TGTGGCCCGC GCCGTGGCAG
GAGGTCCGGC TGGACCGGCT GGGTCCGGAC GACGGCACGG CGCTCGGCGC GATCCTCACC
GGATGCCGGG GCGCGACGGT GGTCGACGGT GCGGACGCGT TGTCCTTCGC ACTGCGCGCC
GATCCGGGTG TCCCGGTGTC GCTGGCGCTG TGGCGGAACC TGCGCGGCTT CCCCGCGAGG
CACCCCTATC GCAGCATCGG TGTCGAGCCG ATGCTCGGCG CCGTGTTCGA CCTCGCCGAA
GCCGGTCCCG GCGATGCCGC CGTGGTGTCG GAGAGCGGCG AGATCCGCTG GGAGATGGCG
GTGACCGCCA CTCGGCGCGA TGACACGCAT GACACGCATG CCGCTCACGA CGCGCATGAC
GCTCACGACT TCGACTGA
 
Protein sequence
MVRRLPLDVR TDLVHGGRWT SLRGADREWL WQNPDAAGRS SVLPGQSFVD AGGLEECVPT 
VRGTPDHGDA WSRPWRSNGG TEVCQSPDFV LTRRIEADGD SLRVHYVLRA EPGYRFLWAA
HALLDVSEQA VLRASDSTAT RVYPDAGARY AEGLWPAPWQ EVRLDRLGPD DGTALGAILT
GCRGATVVDG ADALSFALRA DPGVPVSLAL WRNLRGFPAR HPYRSIGVEP MLGAVFDLAE
AGPGDAAVVS ESGEIRWEMA VTATRRDDTH DTHAAHDAHD AHDFD