Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5014 |
Symbol | |
ID | 8336368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5741943 |
End bp | 5742800 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958113 |
Product | hypothetical protein |
Protein accession | YP_003115715 |
Protein GI | 256394151 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.15636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGAGGC GGCTGCCCTT GGACGTCCGC ACCGATCTCG TCCATGGCGG ACGCTGGACG TCGCTGCGGG GCGCAGACCG CGAGTGGCTG TGGCAGAACC CTGATGCTGC TGGTCGTTCC TCGGTGCTGC CCGGGCAGTC CTTCGTCGAC GCCGGCGGGC TGGAGGAGTG TGTGCCGACG GTCCGGGGTA CGCCGGACCA CGGCGATGCC TGGTCCCGGC CGTGGCGGTC GAACGGCGGC ACCGAGGTAT GCCAGAGTCC TGATTTTGTC CTGACCAGGC GCATCGAAGC AGACGGGGAT TCGCTGCGGG TCCACTACGT TCTGCGGGCC GAGCCGGGAT ACCGGTTCCT GTGGGCGGCG CACGCGTTGC TGGATGTCTC GGAGCAGGCT GTGCTCCGTG CTTCTGACAG CACTGCGACC AGGGTGTATC CGGACGCGGG AGCTCGCTAC GCTGAGGGTC TGTGGCCCGC GCCGTGGCAG GAGGTCCGGC TGGACCGGCT GGGTCCGGAC GACGGCACGG CGCTCGGCGC GATCCTCACC GGATGCCGGG GCGCGACGGT GGTCGACGGT GCGGACGCGT TGTCCTTCGC ACTGCGCGCC GATCCGGGTG TCCCGGTGTC GCTGGCGCTG TGGCGGAACC TGCGCGGCTT CCCCGCGAGG CACCCCTATC GCAGCATCGG TGTCGAGCCG ATGCTCGGCG CCGTGTTCGA CCTCGCCGAA GCCGGTCCCG GCGATGCCGC CGTGGTGTCG GAGAGCGGCG AGATCCGCTG GGAGATGGCG GTGACCGCCA CTCGGCGCGA TGACACGCAT GACACGCATG CCGCTCACGA CGCGCATGAC GCTCACGACT TCGACTGA
|
Protein sequence | MVRRLPLDVR TDLVHGGRWT SLRGADREWL WQNPDAAGRS SVLPGQSFVD AGGLEECVPT VRGTPDHGDA WSRPWRSNGG TEVCQSPDFV LTRRIEADGD SLRVHYVLRA EPGYRFLWAA HALLDVSEQA VLRASDSTAT RVYPDAGARY AEGLWPAPWQ EVRLDRLGPD DGTALGAILT GCRGATVVDG ADALSFALRA DPGVPVSLAL WRNLRGFPAR HPYRSIGVEP MLGAVFDLAE AGPGDAAVVS ESGEIRWEMA VTATRRDDTH DTHAAHDAHD AHDFD
|
| |