| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5010 |
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| Symbol | |
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| ID | 8336364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5738098 |
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| End bp | 5739141 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958109 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003115711 |
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| Protein GI | 256394147 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.152302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.953446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCG CACGTGTCCG CGGCTCGGCC GCAGTCCTCG GTGTCGCGGT GGCGCTGTGC
GCGACCGCTT GCTCGACCGG CAAGTCCTCC ACGGCCGCGG CCTCCTCGGG CGCCCCGGTC
ACCGGCAAGA TCACTCTGAC CTACCTGCAG AAGCAGGGCG ATCAGCAGTA CTTCATCGAC
GAGGCCGACG GCGCCAAGGC CAAGGCCGCC CAGCTCGGGA TCGGCCTGAC GGTCGTGAAC
CTGGGCGACG ACGCCAACCA GACGGTCAGC GACGTGCAGG CCGCCGTCGC GCAGAAGAGC
AGCGGTCTGA TCATCGTGCC GCCGGACCCG GCGGTCGGCC CGCAGGTGGT GCAGCTGGCC
AAGGACGCCG GCATCCCGCT GCTGACGTCG GACGACCAGG TGTGCACCAA CGGCCCGGAC
CCCGCGTCCT GCGCCACGGC GAACCTGGTG CCGCGCGTCG GGTTCAGCGG GACCCAGATG
GGCACCGACG TCGGCAAGAA GGCCGCCGAG CTGTTCGTCA AGGCCGGCTG GAACGCCGCC
GACACCCGCA CGATCTCGGC CTGGAAGCAG GACGTGACCG TGTGCACCGA CCGCGTCAAG
GCGGCCAAGA CCAGCTTCGC CGCCGGCGCC GGCGCGGCCG TGCAGGACAT CGACGTCGCC
ACCGACAACA CCCCGACCGG CGCGCAGGAC AAGGTCGCCG CGACCATCAC CGCGAACCCC
GGCGTCAAGC ACTGGGTGCT CTGGGGCTGC AACGACGAGA ACGTCCAGGG CGGCGTCACG
GCCCTGCAGA ACGCGGGCGT CTCGGCGGAC AACGTGATCG GCGTCGGGCT CGGCGCGTAC
CTGGCGTGCA AGGACTGGGG CAGCTCGCAG CCCACCGGCA TGAAGGCCGC GCTCTACATC
AGCGGCAAGA ACATCGGCGC CCTGGCGGTG CAGACCATGT ACGACAAGCT CAAGAACGGC
AAGGCCTTCC CGCAGGAGGC CGACGCCCCC ACGACCATGG TCGACGCCAC GACCTGGCAG
TCCGCCGGCG TGAAGTGCAG CTGA
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| Protein sequence | MNIARVRGSA AVLGVAVALC ATACSTGKSS TAAASSGAPV TGKITLTYLQ KQGDQQYFID
EADGAKAKAA QLGIGLTVVN LGDDANQTVS DVQAAVAQKS SGLIIVPPDP AVGPQVVQLA
KDAGIPLLTS DDQVCTNGPD PASCATANLV PRVGFSGTQM GTDVGKKAAE LFVKAGWNAA
DTRTISAWKQ DVTVCTDRVK AAKTSFAAGA GAAVQDIDVA TDNTPTGAQD KVAATITANP
GVKHWVLWGC NDENVQGGVT ALQNAGVSAD NVIGVGLGAY LACKDWGSSQ PTGMKAALYI
SGKNIGALAV QTMYDKLKNG KAFPQEADAP TTMVDATTWQ SAGVKCS
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