| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5009 |
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| Symbol | |
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| ID | 8336363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5736212 |
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| End bp | 5738092 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958108 |
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| Product | ABC transporter related |
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| Protein accession | YP_003115710 |
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| Protein GI | 256394146 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.307341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCACT CCAGCCTCCC GGCGGAGCGG ACCGGACTGG CCGCCGAGGC GATCACCAAG
CGCTTCGGCC CGGTCCGGGC TCTGCACGAC GTCACCGTCG AGTTCCCGGC CGGCCAAGTG
ACCGCGCTGA TGGGGGAGAA CGGCGCCGGC AAGTCCACGC TGCTGCGCAT CCTCACCGGC
GACCAGCCAC CGACCCAGGG CCGGATGTCT CTGGACGGAC AGGTCCTGGA CCTGCACTCG
CCGCAGGACG CGCACCGCGC GGGCATCCGG CTCATCCCGC AGGAGCCGGA GATCATCCCG
CACGTCTCCG TCGCGGAGAA CGTCTACACC GGGGCGCTGC CGCGGCGCGG CCCGCGCGGC
TTCGACCGTG CGGGACTGCG CCGCCGGGTA CGCGCCGACC TGGAGCGCCT GGGCTTCGCC
CAAGCCCTGG ACCCGGACCT GCTCGGCTCG CAGCTCACCG CGGCCCAGCG CCAGCTCGTG
GAGATCATGC GGGCTCTGAC CGGGAGCACG CCGGCGCGCG CGATCGCCTT CGACGAGCCG
ACGTCCTCCC TGTCCGAGCA CGAGGTCGAC GCGCTGTTCG CGCTCATCCG CCGACTCCGC
GACCAGGGGA TCGCCGTGAT CTACGTGTCG CACCGGATGA AGGAGGTGTT CCAGCTCGCC
GACCGCGTCG TGGTCCTGCG CGACGGCGAA CTGGCCGGCG CCGCCGCGGC CGCCGACGTC
GACGAGGGCG CCCTGGTCCG CCTCATGGTC GGCCGCGACC TCTCGCAGCT GTTCGTCCGC
GACCACGCCG CGACCGACCG GGTGGTGCTG GACGTCGAGC ACCTGACCAC CGCCGACGTC
CGCGACATCA GCCTGACCGT GCACGCCGGC GAGATCGTCG CCCTGGCCGG ACTCATCGGC
GCCGGACGCT CCGAACTCGC CCTGGCCCTC GCCGGCGACA CCCCGATCCG CTCGGGCCGG
ATCCTCATGG ACGGCATACC GATCCGCCTC CGCGGACCCC GCGACGCCAT CCGCGCCGGC
ATCGGCCTGG CGCCCGAGGA ACGCAAAGCG CAGGCCCTGT TCGCCCAGCG CACCATCCGC
GACAACACGA CACTGGTCAG CCTCCGCCAC CTGCGCCGCT GGCGCTTCGT CCGCCGCCGC
GCGGAGAAGG CACTCGCGCA GGAATACGCC AACCGGCTCC GAGTCCGCGC CCCCTCCATC
GAGGCCGAAG TACGGACCCT GTCAGGCGGC AACCAGCAAA AGGTGGTCCT GGCCCGCTGG
CTCGCCCGCA AGCCGGCCGT CCTGATCCTC GACGAGCCCA CCCGCGGCGT CGACGTCGGC
GCCAAGGCCG AGATCTACCA GATCATCGCC GACCTGGCCT CCGCCGGCAC CGCGATCCTG
GTGATCTCCT CAGAACTCCC CGAAGTCCTC GGCCTCGCCG ACCGCATCCT GGTCATGCAG
AACGGCCGCA TCACCGGCGA ACTCGGCCGC GCCGACGCCT CCGAGGAGAA GATCCTCGCC
CTGGCGATGA TCGACGACCT CGGCTCGCCG GGAGCGGAGG AGCTGCCTGG AGCTCGGGAT
TCCGGGGCGC CTGATTCGGC TGGCTCTGCT TCTCCCGATT CCGTGTCGAC TGCCGCAGCT
GATCAGCCTG GCTCTGCCTC AGTCGACTCC ACTTCGCCGG ATCGTGCGGT GCCGACTACT
TCTGCGTCGG CCGATTCCGG CTCGCAGGCA GCGCCGGATT CCGCGTCACC TGCCGCAGCT
GAATCATCTG GCTCTGGCTC GCAAGATTCC GCCTCGGTCG CCCCTTTATC CGGCGACTCC
GCCTCGCCTG CTCCGCCCGC CACCAACGTC GTGCCGATCC GGGGAGTTGC CGGATCCGCC
TCGGAAGGCA GTGTCCGATG A
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| Protein sequence | MDHSSLPAER TGLAAEAITK RFGPVRALHD VTVEFPAGQV TALMGENGAG KSTLLRILTG
DQPPTQGRMS LDGQVLDLHS PQDAHRAGIR LIPQEPEIIP HVSVAENVYT GALPRRGPRG
FDRAGLRRRV RADLERLGFA QALDPDLLGS QLTAAQRQLV EIMRALTGST PARAIAFDEP
TSSLSEHEVD ALFALIRRLR DQGIAVIYVS HRMKEVFQLA DRVVVLRDGE LAGAAAAADV
DEGALVRLMV GRDLSQLFVR DHAATDRVVL DVEHLTTADV RDISLTVHAG EIVALAGLIG
AGRSELALAL AGDTPIRSGR ILMDGIPIRL RGPRDAIRAG IGLAPEERKA QALFAQRTIR
DNTTLVSLRH LRRWRFVRRR AEKALAQEYA NRLRVRAPSI EAEVRTLSGG NQQKVVLARW
LARKPAVLIL DEPTRGVDVG AKAEIYQIIA DLASAGTAIL VISSELPEVL GLADRILVMQ
NGRITGELGR ADASEEKILA LAMIDDLGSP GAEELPGARD SGAPDSAGSA SPDSVSTAAA
DQPGSASVDS TSPDRAVPTT SASADSGSQA APDSASPAAA ESSGSGSQDS ASVAPLSGDS
ASPAPPATNV VPIRGVAGSA SEGSVR
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