| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5006 |
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| Symbol | |
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| ID | 8336360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5730922 |
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| End bp | 5732472 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958105 |
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| Product | glycoside hydrolase family 5 |
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| Protein accession | YP_003115707 |
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| Protein GI | 256394143 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.180234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC CCACGCACCA GCATCCAGAA CGTCGCCGGC GCCATCCATG GCGTGCGGTA
GCCGCTTGGA CAGCGGCCGC AGCGCTGATC ACCGCCACGC TGTCGGCGAT CGGCGGCACC
GCCTCGGCGG CGACCGGCGC GACCGGCACG ATCACGGGCC AGCAGAGCGG ACGCTGCGTC
GACGCGCAAA GCGCCGGCAC AGCGAACGGC ACCGTGGTCC AGCTCTACGA CTGCAACGGC
ACCGGCGCGC AGCAGTGGCA GGTCCGCTCC GACGGCTCCG TGCTGAACCC CAACTCGGGC
CGATGCCTCG ACGTGACCGG CGCCGGCACG GCGAACGGAA CCCGCGTCCA GCTCTACGAC
TGCAACGGCA CCGGCGCGCA ACACTGGCAA GTACGCGCCG ACGGCTCCGT CCTGAACGCC
ACCTCGGGAC GGTGCCTCGA CGCGAACGGC AGCGCCAACG GCTCCTACCT GCAAATCTGG
GACTGCGCGG GTAGCGGCAA CCAGCACTGG ACGGTCAACG GCAGCAGCGG CGGAGGCGGT
GACAACGCCT TCTGGTCGCA GATCCACGCC GGCTGGAACC TCGGCAACTC CTTCGACGCG
ACCCCCTGCG AGACCTGCTG GGGCAACCCG GCGACGACGA AGCCGATGAT CGACCTGATC
GCCACCAAGT TCAACTACCT GCGCATCCCG GTGACCTGGT ACCCGCACAT GACCAGCGGA
GCGCCGAACT ACACCGTCGA CCCCGCCTTC TTCGCGCGCC TGAAGCAGGT CGTGGACTGG
GCCATCGCCG ACAACATGTA CGTGGACGTC AACGTCCATC ACGACGGCGG CGGCGGCAAC
TGGCTCACCC CGAGCACCGG AGCCATGGGC ACGACCGAGC CGGAGTTCAC CGCGCTGTGG
CGGCAGATCG CCACCTATTT CAACGGCGAG AGCGACCATC TGTTGTTCGA GGCGATGAAC
GAGCCGCAGG ACGCCAACGG CGGCAACCGC TACGGCGGCG GCACGTCCGA CAACTGGGGA
CCCATCAACA CCCTGAATCA GGACTTCGTG AACACGGTCC GCGCGACCGG CGGCGCCAAC
GCCACCCGCT GGCTGATCGT GGTCCCCTAC GGCGCGAACG CCCAGACCGG CGCCGACAAC
CTCGCCGTGC CCGCCGGGGC GAACATCGCG GTGTCGGTGC ACACGTACAA CCCCTGGGCC
TTCTGCTCCA CCACCGCCCC GAACTACGTC ACCTGGGACG GCTCGATGAA CTACCTGCCC
GACGGCGACG TGGACAACGC CAACCGGCTG TTCACCAGCC GCGGCATCCC GGTGATCTGG
ACCGAGTACG GCGCCACCGT CAAGCCGTAC AACGGCGGCG ACAACTCGGC GCAGGTCGCG
AACTTCGAAT CACACATCAC TTCCTACGCC GCCCAGCACG GCCAGAAGAC AGTGGTGTGG
GACAACGGCT CGATCGGCGT CGGCGACGAT CAGTTCGGCC TCATGAACCG CAACTCAGTG
CAATGGCAGC ACTCGAACAT CGTTAACGCG ATCCAGGCTG CGGCCGGCTG A
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| Protein sequence | MTQPTHQHPE RRRRHPWRAV AAWTAAAALI TATLSAIGGT ASAATGATGT ITGQQSGRCV
DAQSAGTANG TVVQLYDCNG TGAQQWQVRS DGSVLNPNSG RCLDVTGAGT ANGTRVQLYD
CNGTGAQHWQ VRADGSVLNA TSGRCLDANG SANGSYLQIW DCAGSGNQHW TVNGSSGGGG
DNAFWSQIHA GWNLGNSFDA TPCETCWGNP ATTKPMIDLI ATKFNYLRIP VTWYPHMTSG
APNYTVDPAF FARLKQVVDW AIADNMYVDV NVHHDGGGGN WLTPSTGAMG TTEPEFTALW
RQIATYFNGE SDHLLFEAMN EPQDANGGNR YGGGTSDNWG PINTLNQDFV NTVRATGGAN
ATRWLIVVPY GANAQTGADN LAVPAGANIA VSVHTYNPWA FCSTTAPNYV TWDGSMNYLP
DGDVDNANRL FTSRGIPVIW TEYGATVKPY NGGDNSAQVA NFESHITSYA AQHGQKTVVW
DNGSIGVGDD QFGLMNRNSV QWQHSNIVNA IQAAAG
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