| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5005 |
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| Symbol | |
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| ID | 8336359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5730080 |
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| End bp | 5730769 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958104 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003115706 |
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| Protein GI | 256394142 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.143864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGG TGGTCGGGCT CGGGGCGGAA GGGGTGGGAG CCATGGTGGA GGCGGCGCCG
GTACGCCGGC GGGTGCGGTC GCGGCTGCCG GCGGCGAAGC GGCGGCCGCA GATCATCAAG
GTGACCTCCG AGCTGATCGC CGAGCGCGGC TACTGGGGGC TGTCGATGCA GGACGTCGCG
GACCAGTGCG GGCTGACCGT GCCGGGCGTG CTGCACTACG TCGGGTCCAA GGTCGGGTTG
CTCGTGGCCG TGCTGGAACA GCGCGATGTC GAGGACGCGC AATCGCTGCG CGAGCAGCTC
GGCGTGGCCG AGGACGAGGT GCCCGACGAG TGGTCCGGCG GCGGTCCGGA GGGCGTCGAT
CTGCGGCAGT TGTGCGCGGC GACGATGCGG CGCAACGCGC GGCAGCCGCA GATCGTGCGG
CTGTTCGCCG TGCTGGAGGC CGAGTCGCTG GATCCGGGGC ACCCCGCCTA CGACTACTTC
GTGGCGCGGC AGGCGCGGGT GGTCTCCTCC TTCGCGGCGC TCGCCGGGCC GTTCACCGCC
GCCCCGGAAG CACTCGCGCG GCAGATCGTG GCGATGATGG ACGGTCTTCA GCTGCAGTGG
CTGCGTGCTC AGCAAAGCAT TGATCTGGTC CAGGAGTGGG AAGCGGCGGC CGAGATGCTG
TTCGGTCCGC ATACTGACGC GCAGCCCTGA
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| Protein sequence | MPPVVGLGAE GVGAMVEAAP VRRRVRSRLP AAKRRPQIIK VTSELIAERG YWGLSMQDVA
DQCGLTVPGV LHYVGSKVGL LVAVLEQRDV EDAQSLREQL GVAEDEVPDE WSGGGPEGVD
LRQLCAATMR RNARQPQIVR LFAVLEAESL DPGHPAYDYF VARQARVVSS FAALAGPFTA
APEALARQIV AMMDGLQLQW LRAQQSIDLV QEWEAAAEML FGPHTDAQP
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