Gene Caci_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5000 
Symbol 
ID8336354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5724117 
End bp5724623 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content68% 
IMG OID644958099 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003115701 
Protein GI256394137 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.608865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGATC CGACACCCGG CCTGAACTCC CAGCAACTCG GCGCGTACTT CGCCCTGATG 
GAAGTCAGCA GCCTGCTCCA GTACGCGGTG GAAGAGCATC TGCGCGCCGA TGGCGACTTG
AGCTACGTGC AGTTCGAGAT CCTGGCCCGC CTGGTGGACG CATCTGAGGG CCGGTTGCGG
ATGACCGATC TGGCCGACGG GCTCGTGTAC AGCCGCAGCG GGCTCACCTA TCAGGTGGGG
CTGTTGGACA AGCGCGGGCT GATCACGCGC TCGCCGTCGC CGGATGACGA GCGCAGCGTC
ATCGTGAGCG TCACGGCGGC CGGCCGGGAC CTGATCGCCC GCGTGCTTCC CGGGCATGTC
GACCGCGTGC GGCAGCTGCT GATTGAGCCG ATGACCGGCG AGGATCTCAC CGCCCTCGGT
GCGATTCTGG GTCGTGTGCG CGACCATATG CGCGCCAATC CGCCGCGGTC GGCCAAGCCG
CGCGCCGCCC GCAACCGCAC CACCTGA
 
Protein sequence
MSDPTPGLNS QQLGAYFALM EVSSLLQYAV EEHLRADGDL SYVQFEILAR LVDASEGRLR 
MTDLADGLVY SRSGLTYQVG LLDKRGLITR SPSPDDERSV IVSVTAAGRD LIARVLPGHV
DRVRQLLIEP MTGEDLTALG AILGRVRDHM RANPPRSAKP RAARNRTT