Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5000 |
Symbol | |
ID | 8336354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5724117 |
End bp | 5724623 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958099 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003115701 |
Protein GI | 256394137 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.608865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGATC CGACACCCGG CCTGAACTCC CAGCAACTCG GCGCGTACTT CGCCCTGATG GAAGTCAGCA GCCTGCTCCA GTACGCGGTG GAAGAGCATC TGCGCGCCGA TGGCGACTTG AGCTACGTGC AGTTCGAGAT CCTGGCCCGC CTGGTGGACG CATCTGAGGG CCGGTTGCGG ATGACCGATC TGGCCGACGG GCTCGTGTAC AGCCGCAGCG GGCTCACCTA TCAGGTGGGG CTGTTGGACA AGCGCGGGCT GATCACGCGC TCGCCGTCGC CGGATGACGA GCGCAGCGTC ATCGTGAGCG TCACGGCGGC CGGCCGGGAC CTGATCGCCC GCGTGCTTCC CGGGCATGTC GACCGCGTGC GGCAGCTGCT GATTGAGCCG ATGACCGGCG AGGATCTCAC CGCCCTCGGT GCGATTCTGG GTCGTGTGCG CGACCATATG CGCGCCAATC CGCCGCGGTC GGCCAAGCCG CGCGCCGCCC GCAACCGCAC CACCTGA
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Protein sequence | MSDPTPGLNS QQLGAYFALM EVSSLLQYAV EEHLRADGDL SYVQFEILAR LVDASEGRLR MTDLADGLVY SRSGLTYQVG LLDKRGLITR SPSPDDERSV IVSVTAAGRD LIARVLPGHV DRVRQLLIEP MTGEDLTALG AILGRVRDHM RANPPRSAKP RAARNRTT
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