Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4999 |
Symbol | |
ID | 8336353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5723196 |
End bp | 5724101 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958098 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003115700 |
Protein GI | 256394136 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.662496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGGG CGCTACTGGC GGACTTTCTC CGCGCCCGCC GCGAGGCGTT GCAGCCGGAG GACGTCGGGC TTCCGCGCGG CTCCCGGCGC CGGGCCGGCG GGCTGCGCCG CGAAGAGGTC GCGATGCTGG CCGGGATGTC GACCGACTAC TACAGCCGGA TCGAGCAGCG GCGTGGTCCG ATGCCGTCCG AGCCGATACT CGCCGCCCTG GCGCAGGGCC TGAAGCTCAG CCCGAGCGAG CGCGAGCACC TGTTCGCGCT CGGCGGGCAC TCGGCGCCGC GGCGCAGCCT GCGCGACGAG CGCGTCAGTC CCGCCGTCAC GCGCATCGTC GAGCGGCTGG GGGACACGCC CGCGATCGTG TTCTCGCGAT TCGGCGAGGC GTTGCTCCAG ACTCCCGGTG CGGTCGCCCT GTTCGGTGAC TACACGCGGT TCAGCGGGAT GTCCCGCTAC CTGGTCTACC GCTGGTTCAC CGACCCGGCG CAACGCGCCA TCTATCCGCC CGAGGACCAC GATCTGCGCG GCCGGGTCTT CACCGTGGAC CTGCGGGCGG CGTACACGGC CGACCCCACG GGCACCGCCG GAGAGATCGT CGAGGCGCTG CTGGCGGTCA GTCCGGCCTT CGCCGAGGTC TGGCGGCGCC ACGAGGTGGA CGTCACGCAC CACCACGAAC TCAAGCGCTA CCGGCATCCG GTGCTGGGCG ATCTGGAGAT GTACAGCCGG CGGCTCTACG ACCCCGACGA GGGCCAGGAC CTGCTGGTCT TCATGGCCGA GCCCGGTTCG GCGAGCGAGG AGAAGCTTCA GCGCCTGATC CCCGCTGACG GCAGCGGCGA CGGCGCCGGC GACAGCAGCG GCAGCGGCGA CGGCGACAGC AGGGGCAGCG GCAGCGGTGC CGAGGCGCTG ATCTAA
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Protein sequence | MDRALLADFL RARREALQPE DVGLPRGSRR RAGGLRREEV AMLAGMSTDY YSRIEQRRGP MPSEPILAAL AQGLKLSPSE REHLFALGGH SAPRRSLRDE RVSPAVTRIV ERLGDTPAIV FSRFGEALLQ TPGAVALFGD YTRFSGMSRY LVYRWFTDPA QRAIYPPEDH DLRGRVFTVD LRAAYTADPT GTAGEIVEAL LAVSPAFAEV WRRHEVDVTH HHELKRYRHP VLGDLEMYSR RLYDPDEGQD LLVFMAEPGS ASEEKLQRLI PADGSGDGAG DSSGSGDGDS RGSGSGAEAL I
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