Gene Caci_4999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4999 
Symbol 
ID8336353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5723196 
End bp5724101 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content72% 
IMG OID644958098 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003115700 
Protein GI256394136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.662496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGGG CGCTACTGGC GGACTTTCTC CGCGCCCGCC GCGAGGCGTT GCAGCCGGAG 
GACGTCGGGC TTCCGCGCGG CTCCCGGCGC CGGGCCGGCG GGCTGCGCCG CGAAGAGGTC
GCGATGCTGG CCGGGATGTC GACCGACTAC TACAGCCGGA TCGAGCAGCG GCGTGGTCCG
ATGCCGTCCG AGCCGATACT CGCCGCCCTG GCGCAGGGCC TGAAGCTCAG CCCGAGCGAG
CGCGAGCACC TGTTCGCGCT CGGCGGGCAC TCGGCGCCGC GGCGCAGCCT GCGCGACGAG
CGCGTCAGTC CCGCCGTCAC GCGCATCGTC GAGCGGCTGG GGGACACGCC CGCGATCGTG
TTCTCGCGAT TCGGCGAGGC GTTGCTCCAG ACTCCCGGTG CGGTCGCCCT GTTCGGTGAC
TACACGCGGT TCAGCGGGAT GTCCCGCTAC CTGGTCTACC GCTGGTTCAC CGACCCGGCG
CAACGCGCCA TCTATCCGCC CGAGGACCAC GATCTGCGCG GCCGGGTCTT CACCGTGGAC
CTGCGGGCGG CGTACACGGC CGACCCCACG GGCACCGCCG GAGAGATCGT CGAGGCGCTG
CTGGCGGTCA GTCCGGCCTT CGCCGAGGTC TGGCGGCGCC ACGAGGTGGA CGTCACGCAC
CACCACGAAC TCAAGCGCTA CCGGCATCCG GTGCTGGGCG ATCTGGAGAT GTACAGCCGG
CGGCTCTACG ACCCCGACGA GGGCCAGGAC CTGCTGGTCT TCATGGCCGA GCCCGGTTCG
GCGAGCGAGG AGAAGCTTCA GCGCCTGATC CCCGCTGACG GCAGCGGCGA CGGCGCCGGC
GACAGCAGCG GCAGCGGCGA CGGCGACAGC AGGGGCAGCG GCAGCGGTGC CGAGGCGCTG
ATCTAA
 
Protein sequence
MDRALLADFL RARREALQPE DVGLPRGSRR RAGGLRREEV AMLAGMSTDY YSRIEQRRGP 
MPSEPILAAL AQGLKLSPSE REHLFALGGH SAPRRSLRDE RVSPAVTRIV ERLGDTPAIV
FSRFGEALLQ TPGAVALFGD YTRFSGMSRY LVYRWFTDPA QRAIYPPEDH DLRGRVFTVD
LRAAYTADPT GTAGEIVEAL LAVSPAFAEV WRRHEVDVTH HHELKRYRHP VLGDLEMYSR
RLYDPDEGQD LLVFMAEPGS ASEEKLQRLI PADGSGDGAG DSSGSGDGDS RGSGSGAEAL
I