Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4997 |
Symbol | |
ID | 8336351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5720796 |
End bp | 5721914 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644958096 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003115698 |
Protein GI | 256394134 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.385337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGT CCGGCGCCGC GCAGACCTGC TCCCGCAAGG CAGGCTCGCC GAACCCGGCG CCCACGAACC AGGAGGGTGG AGCCGCCTTG GCCGCACGGC CCGCACGCAC GCCGGCGTCG CAGACTCCGA CCATGGCCGA CGTCGCGCTG GTGGCCGGGG TGTCGCACCA GACGGTGTCC CGGGTGCTCA ACGACCAGCC GAACGTCCGC GCCGAGACGC GCGCCCGGGT GGTGGACGCG ATCCGCGAGC TGGGCTACCG GCCCAACTCC GCGGCGCGGC AACTGGTGAC CCGGCGCTCG CAGACCCTCG GCGTCATCAG CTTCGACACC ACGCTCTACG GTCCGGCTTC CATGCTTTAC GGCATCGAGC AGGCGGCGCG CGACGCCGAC TACTTCATCA GCATCGTGAG TCTGCGGGCG ATGAACCGGA GCTCGGTGCT GGAGGCCGTG GACCGGCTGC GCGACCAGGC CGTGGAGGGC ATCGTGGTGA TAGCGCCGCA GACCTCCGCG GCCGGCGTGC TGGCCCAGGC CGCGGCCGGG GTGCCGCTGG TCGGCGCCGG CTGCGGCCCG GCCGAGCAGG TCCCGATGGC CGCCATCGAC CAGCGCGAGG GCGCCGCCAT GGCCACCCGC CACCTGCTCG ACCTCGGCCA CCGCACGGTG CACCACGTCG CCGGCCCGGT CGGCTGGTTC GACGCCACCG GCCGCGCCGA GGGCTGGCGC GCCGAACTGG AACAGGCCGA CCGACCGGTC CCGCCGCCCC TGCGCGGCGA CTGGAGCGCC CGCTCCGGCT ACGCCGCCGG CCGCGCCCTG GCCGCCGAGC CCGACCTCAC GGCCGTGTTC TGCGCCAACG ACCACATGGC CCTCGGCCTG CTCCGCGCCT TCCACGAAGC CGGCCGCCAG GTCCCGGCCG AGGTGAGCGT CGTAGGGTTC GACGACATCC CGGAATCGTC GTACTTCACT CCCCCGCTGT CCACGGTCCG CCAGGACTTC AGCGAACTGG GACGCCGAAG CCTGGAGCTG CTGCTCGAAC GGCTGGAGAA CCCCGCGGCG CCCCCGGCGG AGCAGGTGCT GATCACCCCG GACTTGATAG TGCGGGCGAG CGCGCGACCG CCGGCCTGA
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Protein sequence | MGASGAAQTC SRKAGSPNPA PTNQEGGAAL AARPARTPAS QTPTMADVAL VAGVSHQTVS RVLNDQPNVR AETRARVVDA IRELGYRPNS AARQLVTRRS QTLGVISFDT TLYGPASMLY GIEQAARDAD YFISIVSLRA MNRSSVLEAV DRLRDQAVEG IVVIAPQTSA AGVLAQAAAG VPLVGAGCGP AEQVPMAAID QREGAAMATR HLLDLGHRTV HHVAGPVGWF DATGRAEGWR AELEQADRPV PPPLRGDWSA RSGYAAGRAL AAEPDLTAVF CANDHMALGL LRAFHEAGRQ VPAEVSVVGF DDIPESSYFT PPLSTVRQDF SELGRRSLEL LLERLENPAA PPAEQVLITP DLIVRASARP PA
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