Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4983 |
Symbol | |
ID | 8336337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5699915 |
End bp | 5701531 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958082 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003115684 |
Protein GI | 256394120 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000279482 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00229382 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACGGAGA TACGCACTGA CGTGCTGGTG GTGGGCGGCG GGCTCGGCGG CGTGGCCGCG GCGCTGGCCG CGGCACAGCA CGGGGCGCAG GTGGTGCTCA CTGAAGGGCC GCGGTGGCTC GGCGGGCAGT TGACCGCGCA GGCGACGCCG CCGGACGAGC ATCCGTGGGT GGAGATGTTC GGCGTCACCG CGTCCTACCG CGCGATGCGT GACGGCATCC GCGCCTACTA CCGGCGGCAC TATCCGCTGA CCACGGCGGC GCGCGCCGCC CGGCAGCTGA ACCCCGGAGC CGGGCTGGTC AGCAGGCTGT GTCACGAACC GCGCGTCGCG GTGTCGGTCC TGGAGGCCAT GCTCGCGCCG GCTCGAAGCT CCGGGCGGCT GAAGCTGTTG CAGCCCTACC GGGTGCGGTC GGCGCAGGTC GAGGGCGACA CGATCGTCTC GGTGACGCTG GTGCCGGACG GCGACACCGA CGGCGGCACG GTCACCGTCT ACGCCGACTA CGTGATCGAC GCGACCGAGA CCGGAGACCT GCTGCCGCTG GCCGGGGTCG AGTACGTCAC CGGCGCCGAA TCCCGGGAGC AGACCGGGGA GCCCAGCGCG AAGGACACCG CGCAGCCGCT GAACATGCAG GCGGTGTCCT GGTGCTTCGC CGTCGATCAT GTCGACGGCG ACCACACCAT CGACCGGCCG GCGACCTACA ACCACTGGCG GTCGGTGCGC CCGGACATCT GGCCCGGCCC GCTGTTGGCG TTCTCCTGGC CCAATCCGCG TACGCTGGAG CCCTCCCGCG GCTGGCTCGA CCCGAACCCG CACGACGACC CGCTGGCGGT CGAGGCGGAT CAGAGCAAGG ACGCCGGAAC CGACGACCTG TGGCGGTTCC GGCGCATCGC GGCGCGCAAG CTGTTCGAGC CCGGGGCGTA CGCCAGCGAC GTCACCCTGG TGAACTGGCC GATGATCGAC TACATGGACG GGCCGCTGTT CGAGGTCTCT CCCGACGAGG CGGCCAAACA CCGGCAGGGC GCCCGGGAAC TGGCGCTGTC GGCGCTGTAC TGGATGCAGA CCGAGGCGCC CCGGCCCGAC GGCGGTACCG GCTTCCCGTC GCTGCGGCTG CGCGGCGACC TGCTGGGCAC CGAGGACGGC CTGGCCCAGG ACGTGTACGT GCGCGAGTCC AGGCGCATCC GTGCCCTCAC CACGATCTGC GAGCAGGACG TCTCGATGGC GATCCGCGGC GAGCACGGCG CGACGCGCTA TCCGGACTCG GTGGGCGTCG GCATGTACCG CATCGACCTC CATCCCTCCA CCGGCGGCGA CACGTACCTG GACGTGGCCT CGACGCCGTT CCAGATCCCG CTGGGCGCGC TGCTGCCGCA GCGGGTGACC AACCTGCTGG CCGGCGCCAA GAACATCGGC ACGACCCACA TCACCAACGG CGCCTACCGT CTGCACCCCG TGGAATGGAA CATCGGCGAG GCCGCCGGCA CCCTGGCCGC CCACTGCGCC GCCACCGGCC GCACGCCGCA CGCGGTGCAC GGCTCGCCCG AGCACCTGCA CGATTACCAG TCTCTCCTGA CCAGGCGCGG CGTCCCCCTC GCGTGGCCCG AGATCCGCGG CTACTAG
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Protein sequence | MTEIRTDVLV VGGGLGGVAA ALAAAQHGAQ VVLTEGPRWL GGQLTAQATP PDEHPWVEMF GVTASYRAMR DGIRAYYRRH YPLTTAARAA RQLNPGAGLV SRLCHEPRVA VSVLEAMLAP ARSSGRLKLL QPYRVRSAQV EGDTIVSVTL VPDGDTDGGT VTVYADYVID ATETGDLLPL AGVEYVTGAE SREQTGEPSA KDTAQPLNMQ AVSWCFAVDH VDGDHTIDRP ATYNHWRSVR PDIWPGPLLA FSWPNPRTLE PSRGWLDPNP HDDPLAVEAD QSKDAGTDDL WRFRRIAARK LFEPGAYASD VTLVNWPMID YMDGPLFEVS PDEAAKHRQG ARELALSALY WMQTEAPRPD GGTGFPSLRL RGDLLGTEDG LAQDVYVRES RRIRALTTIC EQDVSMAIRG EHGATRYPDS VGVGMYRIDL HPSTGGDTYL DVASTPFQIP LGALLPQRVT NLLAGAKNIG TTHITNGAYR LHPVEWNIGE AAGTLAAHCA ATGRTPHAVH GSPEHLHDYQ SLLTRRGVPL AWPEIRGY
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