| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4972 |
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| Symbol | |
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| ID | 8336326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5685340 |
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| End bp | 5687238 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958071 |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003115673 |
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| Protein GI | 256394109 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.122581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.3032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTTA CAGCCATGCT CAGACGCAGG ACGCGGCTGG TCGCTGTGTT CCTGCTGGTG
TTCGCGGCCG CGCTGATGAT GCCTGGCCTC GGGTTGTCGG GGACGGCCAA GGCGGCGGCG
GCCTCGTCCC TGCCGTGCGA CCTCTACTCG GCCGGCGGCA CGCCCTGCGA GGCGGCGTAC
AGCACGACCC GCGCGTTGTC AGTCTCCTAC GCCGGGCCGC TGTACCAGGT CCAGCGTGCC
TCGGACGGCA GCCGCCTCGA CGTCCGTGTG CGGTCGGCCG GCGGGGTCGT CGACGTCGCG
CCCGAAAACA GCTTCTGCGG CGGCACGACC TGCACGATCA CCGAGCTGTA CGACCAGACC
GCCAACGCCA ACCACATGCC GATCTCGCCT GGGACGTCGT GCTCCGGGTG CTCGCACGGG
ATCGCCGGTC CCGGGCCCAA CGGAGCGGAC ATCGGCGCGT CAGCCTTGGC GCTGCCGGTG
ACGGTCGGAG GCCAGCCGGC GTACGGAGCC CTGTTCAACG CCCAGGGGAT CGGCTATCGC
ATCACCAACG CCAAGAACGT GCCGACCGGC TCGCAGCCCG AGGGCGTCTA CATGCTCACC
TCGTCGAACC TGACCAGCAA CGGCTGCTGC TTCGACTTCG GTGCGGGGGA GAGCAACGAC
ACCGACGACG GCAACGCCAC CATGAACGCG ATCTACTACG GCACCGACTG CTGGACCCAG
AACTGCACCG GCCCGGGACC GTGGGTGGGC GGCGATCTGG AGAACGGCAT GTACTTCAGC
AACACCGGCG CCAACCCGAC GAGCATCCCC AGCGAGAAGG GATCGTTCCT GACCGCCTGG
GAGAAGAACA ACGGCACGAC CAACTTCACG CTGAAGTACG GCAACGGCCA GCAAGGCGGC
CTGACCCAGT CCTATTCAGG CGCCTTGCCC AACGGCTACA ACCCGATGAA GGTGCAGCCC
TCGATCGAGT TGGGCACCGG CGGGGACAAC AGCATCTGGG GCGACGGGGA GTTCTTCGAG
GGCGCCGTCC TGGCCGGCTT CCCCTCCGAC GCCACCGAGA ACGCGGTGCA GGCCGGGGTT
GTCGCGGCCG GGTTCGCCAA CAACACCACC TACGTTCCGA GCACCGCCTC GCTGGTGAGC
CTGAAGGCGC ACGCCAACGG CCAGTACGTG GACGCGGCGG GCAGCGGTTC GGCGCTCATC
GCGAACGCGG CCTCGACCGG GAAGGCCGAA ACGTTCGACC TGATCACCAA CCCGGACGGA
ACCGCGAGCC TGCGGGCGCA CTCCGACGGC GAGTACGTCA CCGCCGGTAC CTCGCCGCTC
ATCGCCGACC GCACCACCAT CGGCTCCGCC GAGACCTACG ACCTGATCAC CAATGCGGAC
GGCAGCGTCA GCTTTCGGGC GCATGCCAAC GGTGATTACG TCACTGCGGA GAACGCCGGC
GCCTCGGCTC TGATCGCGAA CCGCACCGCC ATCGGTCCGT GGGAGGAGTT CGACGTCGTG
CGCGACACCG CCGCGGTCAG CTTCCGGGCG CACGCGAACA ACGACTATGT GACCGCGGAG
AACGGCGGCG CCGCCTCGCT CATCGCCAAC CGCACCGCCG TCGGCCCGTG GGAGACCTTC
GACCTGATCA GCAACTCCGA CGGCAGCGTC AGCCTGCGGG CCCACGCGAA CAACGACATC
GTCACGGCGG GCACGGGCAG CACCGCCCTG ATCGCCAGCC GCACCTCCAT CGGTACCGGC
GAGGAGTTCG ACCTCGTCCA GAACGCTGAT GGCAGCGTCG GATTCCGAGC GCACGCGAAC
TACCAGTACG TGACCGCCGA CAACGCCGGC GCCTCGCCGC TGATCCCCAA CCGCAACGTG
ATCGGCCAGT GGGAAGAGTT CGACCTCATC TACGACTGA
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| Protein sequence | MPVTAMLRRR TRLVAVFLLV FAAALMMPGL GLSGTAKAAA ASSLPCDLYS AGGTPCEAAY
STTRALSVSY AGPLYQVQRA SDGSRLDVRV RSAGGVVDVA PENSFCGGTT CTITELYDQT
ANANHMPISP GTSCSGCSHG IAGPGPNGAD IGASALALPV TVGGQPAYGA LFNAQGIGYR
ITNAKNVPTG SQPEGVYMLT SSNLTSNGCC FDFGAGESND TDDGNATMNA IYYGTDCWTQ
NCTGPGPWVG GDLENGMYFS NTGANPTSIP SEKGSFLTAW EKNNGTTNFT LKYGNGQQGG
LTQSYSGALP NGYNPMKVQP SIELGTGGDN SIWGDGEFFE GAVLAGFPSD ATENAVQAGV
VAAGFANNTT YVPSTASLVS LKAHANGQYV DAAGSGSALI ANAASTGKAE TFDLITNPDG
TASLRAHSDG EYVTAGTSPL IADRTTIGSA ETYDLITNAD GSVSFRAHAN GDYVTAENAG
ASALIANRTA IGPWEEFDVV RDTAAVSFRA HANNDYVTAE NGGAASLIAN RTAVGPWETF
DLISNSDGSV SLRAHANNDI VTAGTGSTAL IASRTSIGTG EEFDLVQNAD GSVGFRAHAN
YQYVTADNAG ASPLIPNRNV IGQWEEFDLI YD
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