| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4955 |
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| Symbol | |
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| ID | 8336309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5657201 |
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| End bp | 5658577 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958054 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003115656 |
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| Protein GI | 256394092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.117227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTGA AGTTCCGCGC CATCGGCGCG CCAGGCCCGG GCCGGCCGCG TCGGCGTGCC
GGGCTGCTCG CGCTCGGAGC CCTGCTCGCC CTCGGCGCCG CCGCCTGCGG CACGAGCAGT
GGAAAGGCCA ACACGCCGAG CACCGGTGGC AGCTTCAAGA CCGCGGCGCA GACCGGCGGG
ACCCTGACGG TCTGGGTCGA CTCGGACCGG CTGGCCGCCG CGAAGCTGTA CCAGAAGGCC
CATCCCGAGG TGAAGATGGA CATCGTCACC TACGACGGGG ACGCCAACGG CTCCAACTAC
CTGCAGACCA AGGTGTCCCT GTTCAACCGG ACCAGCTCGG GCTGGCCGGA CGTGGTCTTC
AGTTCGCAGA ACAACGAGAC CAGCTGGGCG GTGCAGGCCG GGTTCGCCGC ACCGCTGAAC
AAGGGTCTGA TACCGCAGGC CACCCTGGAC GGCTGGGCCA CCGACGCCAA CGCCCCGTGC
ACCGTGGACG GCACCGTCTA CTGCCTGCGC AACGACCTGT CGCAGACCGT GCTCTGGTAC
AACGACAAGC TGATGAAGCA GTGGGGCTAT CAGGTCCCCA CGACCTGGGA GCAGTACCAG
GCCCTCGGTG AGAAGGTCGC CGCCGAGCAC CCCGGCTACC TGGTCGGCGC CGCCGGCGAC
ACGTTCGCTC CGGAGATCTA CCTGTGGGCG GGCAAGTGCG GCGCCAACCA GATCACCGGG
CCCAAGGCGG TCACGGTCGA CGCCACCAGC GCGGCCTGCA CCAAGATGGC CACGCTGATG
GACACCCTGA TCAAGGACAA GACCCTGTCG ACGTCGAGCG TGTTCAGCTC CGACTTCGAC
AAGAACGAGG CTGACAAGAT CCTGATGATG CCCGGCCCGT CGTGGTACGG CGGAGCGCTG
TTCCAGGGCA CGTTCAAGAC CCCGGCCGGG CAGCTCGGCG TGGCGCCGAT GCCGCAGTGG
TCCGGCGACT CCAGCCCGTC GGTGGGCAAC GTGGGCGGCG GCACCTGGCT GGTCTCGGCG
CACAGCAAGA ACCTGAAGGC CTCGACCGAC TTCGTGACCT GGGTCACCAC CTCGGATGAC
TACCAGGGCA AGCTGGCGCC GGGCTTTCCG GCGTACACGG CGGCGGCCAA GACGTGGCTG
GCGGCGCAGC AGTCCTCCGG GTACTACGCC GACGACATCA CCGCGCCGCT CACCGCCGCG
GCGAACCAGG TCTGGGCGGG CTGGGGCTAC GGGCAGTTCA GCCAGGAGGC GGTCTGGGCC
GCGACCGTCA CCCCCGGCGT CAACGCCGGC AAGACCATCG TCTCGCTGCT GCCGGCCTGG
CAGGACTCGA TCGTGAACCA CGCCAAGGCC GACGGATACC AGGTGGCGAC GAAGTGA
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| Protein sequence | MTVKFRAIGA PGPGRPRRRA GLLALGALLA LGAAACGTSS GKANTPSTGG SFKTAAQTGG
TLTVWVDSDR LAAAKLYQKA HPEVKMDIVT YDGDANGSNY LQTKVSLFNR TSSGWPDVVF
SSQNNETSWA VQAGFAAPLN KGLIPQATLD GWATDANAPC TVDGTVYCLR NDLSQTVLWY
NDKLMKQWGY QVPTTWEQYQ ALGEKVAAEH PGYLVGAAGD TFAPEIYLWA GKCGANQITG
PKAVTVDATS AACTKMATLM DTLIKDKTLS TSSVFSSDFD KNEADKILMM PGPSWYGGAL
FQGTFKTPAG QLGVAPMPQW SGDSSPSVGN VGGGTWLVSA HSKNLKASTD FVTWVTTSDD
YQGKLAPGFP AYTAAAKTWL AAQQSSGYYA DDITAPLTAA ANQVWAGWGY GQFSQEAVWA
ATVTPGVNAG KTIVSLLPAW QDSIVNHAKA DGYQVATK
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