| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4949 |
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| Symbol | |
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| ID | 8336303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5651214 |
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| End bp | 5651981 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958048 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003115650 |
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| Protein GI | 256394086 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.220607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA ACCGATTCGA CCTGACCGGG CGCCTGGCCG TGGTCACCGG AGCACGCCGC
GGCATCGGCC GGGCCATGGC CCGCGCGCTG GCCGAGGCGG GAGCCGACAT CATCGGCGTG
AGCGCGCATC TGGAGGGCGC CGGCAGCGAC GTGGAGAAGG ACGTGACCGC CGCCGGACGT
GCCTTCGAAG CGGTCCAGGC CGACTTCTCC GACCCCGCCG CCGTCGCGGC GCTCGCCGCG
GACCTGGCCG GACGCGAACG CCCGGTGGAC ATCCTGGTCA ACAACGCCGG CACCATCGCC
CGCACTCCCG CCGCCCGGCA CTCCGACGCC GACTGGGCTC TGGTTCTGCA GGTGAACCTC
TCGGCGCAGT TCGTCCTCAC CCGCGCGGTG GGGGAGCGGA TGGTCGAACG CGGCCGGGGC
AAGATCGTCT TCACCGCCTC CCTGCTCAGC TTCCAGGGCG GTATCACCGT GCCCGGATAC
ACCGCCGCCA AGCACGGCAT CGCCGGTCTG ACCAAAGCCC TGGCCAACGA GTGGGCTCCG
CACGGCGTCA ACGTAAACGC CATCGCGCCG GGCTACATCG CCACGGACAA CACCCAGGCG
CTGCGGGACG ACGCGGAGCG CAGCGCGGCG ATCCTCTCGC GCATCCCGGC CGGCCGCTGG
GGAGACGCGG ACGACCTCGC CGGCGCGACC GTCTTCCTCG CCTCGGACGC CGCCGCCTAC
GTGCACGGCG CGATCCTGCC GGTCGACGGC GGCTGGCTGG GCCGATGA
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| Protein sequence | MTSNRFDLTG RLAVVTGARR GIGRAMARAL AEAGADIIGV SAHLEGAGSD VEKDVTAAGR
AFEAVQADFS DPAAVAALAA DLAGRERPVD ILVNNAGTIA RTPAARHSDA DWALVLQVNL
SAQFVLTRAV GERMVERGRG KIVFTASLLS FQGGITVPGY TAAKHGIAGL TKALANEWAP
HGVNVNAIAP GYIATDNTQA LRDDAERSAA ILSRIPAGRW GDADDLAGAT VFLASDAAAY
VHGAILPVDG GWLGR
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