Gene Caci_4945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4945 
Symbol 
ID8336299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5645643 
End bp5646104 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID644958044 
ProductDoxX family protein 
Protein accessionYP_003115646 
Protein GI256394082 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0341702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC TCAGGTCGCT GCCGCCCATC GGCGTGTCGC TGTACCGGAT CGTCATCGGA 
TTCCTGATGG CCTGCCACGG CGCCTCCACC TTGACCGGCT TCCCGGTCAA GGCCACCACC
GGACACACGG TCTCGCCCAC TACCTGGCCC GGCGGCGTCG CGGCGGTGCT CCAACTGGTC
TTCGGGATCG TGGTCATGAT CGGACTGTGG ACGCGGCTGT CGGCCGTCAT CCTGTCCGGG
ACCATGGCCT ACGCCTACTT CTCCGTCCAC CAGAAGCACG CGCTGCTGCC GATGGCCAAC
GGCGGTGAGC CCGCTGCGCT GTTCTCCTGG GCCTTCCTGC TGATCGCCAT CGTCGGCGCC
GGACCACTGG CCGTGGACGC ACTGCTGACG CGGTCGCGCC CAGGCGGCGC GGAGCCCGTC
GGAGCCGATG TACCGGCTCG CCGCTTCACC ATCGCACGCT GA
 
Protein sequence
MPDLRSLPPI GVSLYRIVIG FLMACHGAST LTGFPVKATT GHTVSPTTWP GGVAAVLQLV 
FGIVVMIGLW TRLSAVILSG TMAYAYFSVH QKHALLPMAN GGEPAALFSW AFLLIAIVGA
GPLAVDALLT RSRPGGAEPV GADVPARRFT IAR