| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4935 |
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| Symbol | |
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| ID | 8336289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5632371 |
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| End bp | 5634290 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958034 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003115636 |
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| Protein GI | 256394072 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0997823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCGC TCGGCGATGC CACCGGCGGC CGCATCCTGT TCGGCGGCGA CTACAACCCC
GAACAGTGGC CGCGCGAAGT CTGGGACGAG GACGTGCGCC TGATGCGCGA GGCCGGGGTG
AACCTGGCCA CGGTCGGCGT CTTCTCCTGG GCCCTGCTCG AACCCCGGCC CGGCGAGCGC
GACTTCGGCT GGCTCACCGA GGTGCTGGAT CTGTTGCACG CCAACGGCAT CGGCGTGGGG
CTGGCCACCC CTACCGCGTC GCCGCCGCCG TGGATGGGCC ACCGCTGGCC CGAGACGCTG
CCGCGCAACC CGGACGGGAC GATCCGGACG TACGGTTCGC GCAACGCCTA CTGTCCGTCC
TCTCCGGTGT ACCGGGCCTT CGCCGACGCG ATCTGCGCCG ACCTGGCATC GGTCTACGCG
CACCACCCGG CGCTGCGGAT GTGGCACATC GGCAACGAGT TCGGGACCGT CTGCCACTGC
GACCGGTGCG CCGTGCGCTT CCGCCGCTGG CTCCAGGCCA GATACGGGGA CCTCGACCGG
CTGAACGAAG CCTGGGGCAC CGCCTTCTGG TCGCAGCGCT ACGGCGACTG GGACGAGGTC
ATCCCGCCGC GCCAGGTCCA GTACGTCATC AACCCCACCC AGGACCTGGA CTATCAGCGT
TTTGCCTCCG ACCTGCTGCT GGAGGGCTTC ACGACGGAGC GCGACATCGT GCGCGGCGCC
AACCCCGCCA TCCCGATCAC GACCAACTCC ATGACCTTCT TCAAGGCCAC GGACTTGTGG
CGGTGGGGCG CCGAGGAGGA TTTCACCGCG CTGGACTCCT ACCCGGACCC CAACAGCCCG
CGGGCTGCCC GCGACGGGGC GATGGCCCAG GACCTCATCC GCTCCGTGGG CGGCGGCAAG
CCGTGGCTGA TGATGGAGCA GACCCCGGGC CGCGCCGGAT TCCGGCACGT CGCGACGCCC
AAGCGTCCCG GTCTGAACCG CCTGTGGTCC CTGCAGGCGG TGGCGCGCGG CGCCGACGGG
ATCCTGCACT TCCAGTGGCG CGCCTCCCAG CAGGGCGCCG AACGCACCCA CGGAGCGATG
CTGCCGCATG CCGGCCCTGA TTCAAGGATC TTCCGCGAGG TGTGCGACCT GGGCAAGGAG
CTGGGCGACC TGACCGGCGT CCTGGGCGCC AAGGTGGCCG CCGAGGTCGC CATCGTGCTC
GACTGGGACT CCTGGCGCGC CGTCGAGCTG GACCACCAGC CGCACAGCGG ATTCCGCTAC
GTCGACCGCA TCCGCGAGTA CTACACGCCG CTGTGGAAGA CGAACGTGAC CGTCGACTTC
GTGCATCCGG AAGCCGATCT GAGCCGGTAC AAACTCGTCG TGGCACCGAA CCTTTATCAG
GTCTGTGACG CTGCCGCCGA CAACGTCATC GGCTACGTGG AGCGCGGTGG AAACCTGGTC
GTCGGCCCGT TCTCCGGCGT GGCCGACCCC GACGAGCGCA TCCGCCTCGG CGGGTACCCG
GCGCCGTTCC GGGACCTGCT GGGACTGCGC ATCGAGGAGT ACTGGCCGCT GCCGGACGAC
GAACCGCTCA CCCTGCGCTC AGAACTGTTC GGCGACTTCA GCGCGCGATC CTGGGCCGAG
TGGCTGGCCA CCGGCGCCGG CACGGCGCTC GCCGAGATCG CCACGGGACC GCTGACAGGA
ATCCCCGCGA TCGTGCGCAA CGCCTACGGC GCGGGGACCG CCTGGTACGT GGCCACGCTG
CCCGAGGAGC GGGTGATGGC GCGCCTGCTC GCCCTCGCTT GCGACCAAGC CGGCGTCGAA
TCGGTTCTCC CCGGTCTGCC GGAAGGAGTC GAGGCGGTGC GGCGGGGCGA ATACGTCTTC
GTGCTCGACC ACGGCAGGGG GACCGTCGAG GTCCGGTCGA CGGTCGCGGC CACCCTGTAG
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| Protein sequence | MPSLGDATGG RILFGGDYNP EQWPREVWDE DVRLMREAGV NLATVGVFSW ALLEPRPGER
DFGWLTEVLD LLHANGIGVG LATPTASPPP WMGHRWPETL PRNPDGTIRT YGSRNAYCPS
SPVYRAFADA ICADLASVYA HHPALRMWHI GNEFGTVCHC DRCAVRFRRW LQARYGDLDR
LNEAWGTAFW SQRYGDWDEV IPPRQVQYVI NPTQDLDYQR FASDLLLEGF TTERDIVRGA
NPAIPITTNS MTFFKATDLW RWGAEEDFTA LDSYPDPNSP RAARDGAMAQ DLIRSVGGGK
PWLMMEQTPG RAGFRHVATP KRPGLNRLWS LQAVARGADG ILHFQWRASQ QGAERTHGAM
LPHAGPDSRI FREVCDLGKE LGDLTGVLGA KVAAEVAIVL DWDSWRAVEL DHQPHSGFRY
VDRIREYYTP LWKTNVTVDF VHPEADLSRY KLVVAPNLYQ VCDAAADNVI GYVERGGNLV
VGPFSGVADP DERIRLGGYP APFRDLLGLR IEEYWPLPDD EPLTLRSELF GDFSARSWAE
WLATGAGTAL AEIATGPLTG IPAIVRNAYG AGTAWYVATL PEERVMARLL ALACDQAGVE
SVLPGLPEGV EAVRRGEYVF VLDHGRGTVE VRSTVAATL
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