| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4930 |
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| Symbol | |
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| ID | 8336284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5623519 |
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| End bp | 5625924 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958029 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115631 |
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| Protein GI | 256394067 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.199916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.917817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCAG GAATCCGCCG ACGCGGCGGC CGCTCCCGCC CCGCGCTCCT GGCGGCCGCC
GTCACGCTCG GCGCCGCCGC CTTCGGCATG CCGGCGATCT CGCACGCCGC GACCGCCGCG
ACGCTGTACG TCTCCCCCAC GGGCAGTGGA ACCGCCTGCT CGGCCGGCGC GCCGTGCTCC
ATCACCCAGG CGCAGTCCTC GGTCCGCTCG ATGAACACGT CCATGAGCGG CGACATCGTC
GTGCAGCTGG CCGGCGGCAC CTACCGCCTG TCCGCGCCGT TGGTCTTCAC CACTGCCGAC
TCCGGAAGCA ACGGACACAA CGTCATCTGG CAGGCCGCGT CCGGCGCGGC GCCGGTACTG
TCCGGCGGGC AGCAGGTGAG CGGCTGGACC CTGCACGACT CGGCGAACAA CATCTGGTCC
GCGCCGGTGC CCTCCGGCGC CGACTCCCGG CAGCTGTGGG TGGACAACAC CCTCGCGCCC
CGGGCCGCGG TCCCGATCTC GCGCAGCGAC GTGCAGATCA CCGCCGGCGG CATGACCATC
GTGAACTCGA ACCTGAACTA CCTGGCCTCG CTGCCGGAGC AGAACCGGAT CGAGCTGGAG
AGCCAGAACT CCTTCACCGA CCGGTACGCG CCGGTGTCGA GCATCAGCGG CACCACGATC
ACGATGCAGC AGCCCGCCTG GAACAACAAC AACTGGGGAT ACGACACCCT CGCCAAGCCC
TTCGCCGGCG GCCAGGTGTA CTTGGAGAAC TCGTACTCGT TCCTCAAGAA CGCCGGGCAG
TGGTTCATAG ATCCGCAGGC CGGCCAGCTG TACTACAAAG CCGCCTCCGG CCAGTCGCCC
AGCAGCCACG ACGTCGAGCT CCCCCGCCTG ACCTCGCTGA TCCAGATGAG CGGCAGCTAC
AGCGCTCCGG TCTCGCACAT CACGTTCCAG GGCCTGGCCT TCGAGCACAC CACCTGGCTC
ACGCCGGGCA GCTCGATCGG CTACGCCGAC CAGCAGACCG GCACGTTCCT GGCCAAGCAG
TACTCCCAGC CGTCCAACTT CCTGACCTCC TGCCAGTCCG GGTGCCAGCT GTTCGAGGCC
ACCCGGAACA GCTGGAACCA GGCACCGGCG GCGGTCCAGG TCTCGGCCGC GGCGAACATC
AGCTTCACCG GGGACACCTT CACCCACCTG GGCCAGGTCG CGCTCGGCAT CGGCAACGAC
GCGGACGCGG TCGCCTCGGG CGTCGGGCTC GGAGCCTCCG GCGTCACCGT CGACCACAAC
ACGTTCACGG ACGACTCCGG CGCCGGGATC GCGGTCGGCG GCGTGCAGCC GGACGCGCAC
CACCCGTCCA ACCCGGCGAT GACCGTGCAG AACGTCACGA TCACCAACAA CCTGGTGTCC
AACGTCGCCG AGGACTACAA GGACATGCCC GGCATCCTGT CGACGTACGC CACGCACACC
GACATCGAGC ACAACGAGGT GTCGAACCTG GCCTACGACG GCATCGACGT GGGCTGGGGC
TGGGGCATGA ACGACCCCGG CGGCAGCCAG GACTACGTCA ACCGCGGCAC GTACAACTAC
CAGCCGATCT ACACCACCCC GACCACGCTG AAGAACACCG TCGTCAGCTA CAACAAGGTG
CACGGCACCA AGAAGGTCTT CCACGACGGC GGCAGCATCT ACAACCTGTC GGCCAACCCC
GGCGGCGTGA TCGACGACAA CTACGTCTAC GACAACCAGA ACACCGTCGG CCTGTACCTG
GACGAGGGCT CCCGGTACCT GACGCTGACG AACAACGTCG TACAGGACGC CGGCGTCTGG
GCGTTCACCA ACGCCAGCTC CACCAACAAC ACCAACGACA GCACCTTCTC CTACAACTGG
TACAACTCAG GCGCGACGAA CGTCGCCACC GGCTCCCCGC ACAACAACGT GCTGACCGGC
AACACGCAGG TGAGCGGAGG CTGGCCGACG GCAGCCCAGC AGGTCATCAA CAACTCCGGC
GTATCCGGCA GCACCACTCC TCCGCCACCG AGCGGAGGCG CGCTGCACGC GGTCGGTGCA
GGCAAGTGCG TGGACGTGCC CAACTCGACC ACCACCAGTG GCACGCAGGT GCAGATCTAC
TCCTGCAACG GCCAGGCCAA CCAGGCCTTC ACCCACAACT CCACCAGCGA GCTCACCGTC
ACCGACGCCG GAGTGACCGA CTGCCTGGAT GCCAACAACA AGGGAACCAC CAACGGCACC
AAGGTGATCA TCTATCCCTG CAACGGCCAG CCCAACCAGC AATGGACGAT CAACTCCAAC
GGCACCATCA CCGGCGTCCA ATCAGGACTC TGCCTCGACG TCACCGGCGC ATCCACCGCC
AACGGCGCCC TGGTGGAGCT GTGGACCTGC AACGGCGGCA GCAACCAGCA ATGGACCCTG
AGCTGA
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| Protein sequence | MIPGIRRRGG RSRPALLAAA VTLGAAAFGM PAISHAATAA TLYVSPTGSG TACSAGAPCS
ITQAQSSVRS MNTSMSGDIV VQLAGGTYRL SAPLVFTTAD SGSNGHNVIW QAASGAAPVL
SGGQQVSGWT LHDSANNIWS APVPSGADSR QLWVDNTLAP RAAVPISRSD VQITAGGMTI
VNSNLNYLAS LPEQNRIELE SQNSFTDRYA PVSSISGTTI TMQQPAWNNN NWGYDTLAKP
FAGGQVYLEN SYSFLKNAGQ WFIDPQAGQL YYKAASGQSP SSHDVELPRL TSLIQMSGSY
SAPVSHITFQ GLAFEHTTWL TPGSSIGYAD QQTGTFLAKQ YSQPSNFLTS CQSGCQLFEA
TRNSWNQAPA AVQVSAAANI SFTGDTFTHL GQVALGIGND ADAVASGVGL GASGVTVDHN
TFTDDSGAGI AVGGVQPDAH HPSNPAMTVQ NVTITNNLVS NVAEDYKDMP GILSTYATHT
DIEHNEVSNL AYDGIDVGWG WGMNDPGGSQ DYVNRGTYNY QPIYTTPTTL KNTVVSYNKV
HGTKKVFHDG GSIYNLSANP GGVIDDNYVY DNQNTVGLYL DEGSRYLTLT NNVVQDAGVW
AFTNASSTNN TNDSTFSYNW YNSGATNVAT GSPHNNVLTG NTQVSGGWPT AAQQVINNSG
VSGSTTPPPP SGGALHAVGA GKCVDVPNST TTSGTQVQIY SCNGQANQAF THNSTSELTV
TDAGVTDCLD ANNKGTTNGT KVIIYPCNGQ PNQQWTINSN GTITGVQSGL CLDVTGASTA
NGALVELWTC NGGSNQQWTL S
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