| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4926 |
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| Symbol | |
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| ID | 8336280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5616868 |
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| End bp | 5619114 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958025 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115627 |
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| Protein GI | 256394063 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.164927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.377281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGGC TCGCCGCGGC GGCCGCGGTG ATGCTGGCGT TGGCCGTCCC GTCGTTCTCG
CCGGCCCGCG GGCAGGCCGC CGCGGGTGAG GCGCTGAGCG TGAATTTGGC GAGCCCGACG
CACTCGGCCA CCGGGGTGGG GGAGGGCTTC CTGTACGGCC TGACCGTCGA CGGCACACAG
CCCGCCGACC AGTACCTGGA ACCGCTCGGC GTCACGGCCC ACCGGGGCGG CGGATGGTAT
TCCGGCGGCT GGATCAAGGA CGGCTACCAG TACGGCTCGG CCTCGCAGGC CGACGTGGCC
TCGATCATCG CCCAGGCGCG CCGGCTGACC CAGCCGCCGT ATCACGCGCA GTACCAGGTG
CTCATGACCG ACATCTACGG TCTGAACGGC GGCCAGCCCT CGAACACGCG CTACCCCTGC
GACAACGGCG ACTGCTCGAA CTGGGCCTCG TTCATCGACT CCACGGTCGG CGCGCTGCAG
GCCTCGGGAG TGAAGTTCGC CTTCGACATC GACAACGAGC CGGACATCTC GGTCTTCTGG
ACCCGGGGTG TGAACAGCAC GCAGTACTTC CAGATGTGGG ACACCGCCTA TCGGGAGATC
CGGCGGGTCG CCCCGAACGC GCAGATCGTC GGACCGTCCT TCGCGTACAC CCCGCAGAGC
CGGGCGAGCC AGTGGCAGAC GTGGCTGGCC CACGTGAAGG CGGCCGGAAC CGTCCCGGAC
ATGATCACCA ACCACGACGA GGGCGACGTC GACGACCCGG TCGCGGTGTC CCAGGCGCTC
AACAGCGTGG TATCGGCGGC GGGGCTGAGC CCGATCCCGC TGTCGGCTAA CGAGTACCAG
CCGGCCGACC GGCAGACCGC CGGCGTGACC GCGTGGTACC TGGCGCGCTT CGCCCAATCC
GGGTACACCA ACGCGATGCG CGGCAACTGG CAGTGCTGTA TCTCGCCGAA CCTGACCGGG
GTCATCGATC CGAACGCCAG CGGCGGTGCG GCCTACACCG GCAACTGGTG GGCGATGCGG
GCCTACGCGG ACCTGACGGG TTCGCTGGTC TCCACCTCCG GCCAGGTGGG CTCGACGGCG
ATCTCCGCGG CGGAGGACAG CAGCCGTCGG CGCGCGGTGG CCGTGGTCGG TGATGCCAAC
GGCTATACCG GCGCGGCGTC AGTGGCCTTC ACCGGCTTCT CATCGGTGCC CTGGCTGGCG
AACAACGGCA CCGCCGAAGC GGTCGTCTAT CGGATCCCGG ACCAGTCCGG GCTCACCGCA
CCGCAGGTGG TCTCCGATCA GATCGTGAAC GTCTCCGGCG GATCGGTGAC GCTGCCGCTC
AATTTCCAGG CCGCGCACGA CGCCTTCGCG GTCTACCTGC TGCCCGGCTA CGCGCAGGGC
TTCACCAGCA GCGTGGTCAA CCAGGGCGAC AACCTGTGCA TGGAGAACCC CGCCTTCACC
ACCGTGGCTT CGGCACAGTT CGACCAGGGA GCGTGCGGGG CGGGCGCCGA CCAGCAGTTC
CAGTTCGTCC CGACCTCGGC CGGCAGCAGC ACGTACTTCG TCCGTCCGAT GACGCCCGGT
GATTGTGTGG GAGTCGCGGG CAGTTCGACG TCCGCGGGCG CGGCGGTGAC GCAGAATCCG
TGCGGCTATG GCACCGACCA ACAGTTCACC CTCCGCTCCG TGGCCACCGG CGTCTACCAG
GTGGTCAACC AGAACTCAGG GCTCTGCGTC GTCCCCAACG GCGGCGGCAC GGCGTCGGGG
ACCGGGCTGG TCCAAGCCGC TTGCAGCACC GCGGGCTCGG GGGAGTGGAA GATCCAGCAG
GGCCAGACGA CCGGCTTTCC CAGCGGCTAC CACCAGTTCG TCATCGGGAG CAACAGCCTG
TGCCTGGACG TCTACGGTGC CAGCGGCGCC GGCGGCGCTG CGATCGATCA GTGGACCTGC
AACAGCCAGA CCAACCAGCA GTTCCAGTTC GTGCCCGTCT CCGGCGGGTA CGGCGAGCTT
CAGGCTCGGA ACTCCGGTGA CGACGTGACG GTGTCCGGCG GCTCCACCAC CGCGGGACAG
CCGGACATCG TGCAGCAGAG CCCGAACGGC GCGGCGAGCA GTCTGTGGCT TCCGGTCCGG
CAGTCCGACG GCGGCTATGC GTTCCAGAAC CAGGGCAGCG GCCTGTGCCT GGACGTCTAC
GGCGCCAGCA GCAGCCTGGG CCAGCAACTC GACCAGTGGC AGTGCAAGAA CGCCTCGGGA
AGCAACCAGG ACTTCACCGT CCGCTGA
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| Protein sequence | MRRLAAAAAV MLALAVPSFS PARGQAAAGE ALSVNLASPT HSATGVGEGF LYGLTVDGTQ
PADQYLEPLG VTAHRGGGWY SGGWIKDGYQ YGSASQADVA SIIAQARRLT QPPYHAQYQV
LMTDIYGLNG GQPSNTRYPC DNGDCSNWAS FIDSTVGALQ ASGVKFAFDI DNEPDISVFW
TRGVNSTQYF QMWDTAYREI RRVAPNAQIV GPSFAYTPQS RASQWQTWLA HVKAAGTVPD
MITNHDEGDV DDPVAVSQAL NSVVSAAGLS PIPLSANEYQ PADRQTAGVT AWYLARFAQS
GYTNAMRGNW QCCISPNLTG VIDPNASGGA AYTGNWWAMR AYADLTGSLV STSGQVGSTA
ISAAEDSSRR RAVAVVGDAN GYTGAASVAF TGFSSVPWLA NNGTAEAVVY RIPDQSGLTA
PQVVSDQIVN VSGGSVTLPL NFQAAHDAFA VYLLPGYAQG FTSSVVNQGD NLCMENPAFT
TVASAQFDQG ACGAGADQQF QFVPTSAGSS TYFVRPMTPG DCVGVAGSST SAGAAVTQNP
CGYGTDQQFT LRSVATGVYQ VVNQNSGLCV VPNGGGTASG TGLVQAACST AGSGEWKIQQ
GQTTGFPSGY HQFVIGSNSL CLDVYGASGA GGAAIDQWTC NSQTNQQFQF VPVSGGYGEL
QARNSGDDVT VSGGSTTAGQ PDIVQQSPNG AASSLWLPVR QSDGGYAFQN QGSGLCLDVY
GASSSLGQQL DQWQCKNASG SNQDFTVR
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