Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4920 |
Symbol | |
ID | 8336274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5609724 |
End bp | 5610419 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958019 |
Product | GntR domain protein |
Protein accession | YP_003115621 |
Protein GI | 256394057 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.774759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGT CCGACAAGGC GATCACCCGT ATCCGAGAGC TCATCCAGTC CGGCCAGCTG CCCCCCGGAT CCCGGCTCCC TCCGGAGCAG CAGCTCGCCG CCGAACTGGG CCTGTCCCGG AACCTGACCC GCGAGGCGGT CAAGGCGCTG GTGGTGGCCC GGGTGCTGGA GATCCGGCGC GGCGACGGAA CCTATGTGAC CAGCCTGGAG CCGGCGGTCC TGCTCGAGGG CCTCGGCTCG GCCGTCGAGC TGCTGCAGGG CGACACCCAG CTGGAGCTCG CCGAGGTGCG CAGACTCTTC GAGCCGGTCG CCACCGGCGT GGCGGCCGTG CGGATCACCG CCGCCGAACT CGCCGAGGTC CAGGGCCACC TGGCGGCGAT GTACGCCGCC AAGGACGACG TCGAGCTGTT GAACCAGCAC GACGCGGCGT TCCACCGCGC CGTGATCGCC GCGACCGGCA ACCAGACCCT CACCTCCCTG CTGGAGGGCA TCTCCCAGCG GACCGTGCGG GCCCGGGTCT GGCGCGGCAT GGTCGACGAC GCCGTCGCCG ACAGCACCGT CGCCGAGCAC CAGGCGATCT ACGACGCGCT CGCCACCGGC GACTCCGCGC TCGCCCACGC CGCGGCGCTC ATGCACATCA GCAGTACCGA GAAGTGGTTC CGGGACCACC TCGCCGGCTC CGAGGACGAG ACATGA
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Protein sequence | MSLSDKAITR IRELIQSGQL PPGSRLPPEQ QLAAELGLSR NLTREAVKAL VVARVLEIRR GDGTYVTSLE PAVLLEGLGS AVELLQGDTQ LELAEVRRLF EPVATGVAAV RITAAELAEV QGHLAAMYAA KDDVELLNQH DAAFHRAVIA ATGNQTLTSL LEGISQRTVR ARVWRGMVDD AVADSTVAEH QAIYDALATG DSALAHAAAL MHISSTEKWF RDHLAGSEDE T
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