Gene Caci_4915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4915 
Symbol 
ID8336269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5604902 
End bp5606062 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content74% 
IMG OID644958014 
Productprotein of unknown function DUF111 
Protein accessionYP_003115616 
Protein GI256394052 
COG category[S] Function unknown 
COG ID[COG1641] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00299] conserved hypothetical protein TIGR00299 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.935518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTGCT GGATCAACCC CTTCACCGGC CTGGCCGGGG ACATGCTGCT CGCCGCCCTC 
CTGGACGCCG GCGCCCCGCT GGAGCAGGTT CGGACCGCCG TCGCGGCCAC CGGCCTGACC
GGCTGGGAGC TGACCGCCGA GCGCGTCAGC GACCACGGTC TGACCGGTAC CCGCGTCCGC
GTCCGCGTCA CCGACCACGC CGCCGAACGC CGGGCCGCCG AGCTCATCGC GCTGGCCTCG
GCGGCCACGC CGCCACCGGT GGCGGCGCGC GCCGTCGCCG CGCTGCGGGC GATCGCAGAG
GTCGAAGCAC GCATCCACGG CGCCGATCCG GCCGCCGTCC ATCTGCACGA GCTGGGCGGC
CACGACACCG TCGTGGACAT CGTCGGCGTC GCGGCCGCGA TGCACGCGCT CGGGGTCGAC
GACGTGGTGT GTGCGCCGCT CCCGCTGGGC ACGGGGCGGG TCAGGAGCGC GCACGGCTTG
ATCCCGGCTC CGGCTCCGGC GACGCTCGCA CTGCTCGCCG GTGCCGTGGT CGTGGGGACC
GACCTGCCCG GGGAGACTGT GACGCCGACC GGCGCGGCAC TGCTGCGCGC GCTGAACGCA
CGCTTCGACC CGGTTCCGGC GATGACGGTG CGCGCCACCG GCTACGGCTT CGGGACCCGC
CGTCTGCCCG ACCGTCCCAA CGTCGTCGCC GTGACCTTCG GCGAGCGGCA GCGGGGCGGA
GGCGGTGGCG ACGGTGAGAC CGTGACCGTT TTGGAGACCA ATCTGGATGA CGTGACCGGC
GAGGTCCTCG GCCACGTCAT CGCCCGCTCG CTGGAAGCCG GGGCGCTCGA CGCGTGGGCG
ACCCCCGCGG TGATGAAGAA GGGGCGCCCC GGGCACGTCC TGCACCTCTT GGTCGAGCAG
CAGGACTGCG ACGCCCTCCA GGAGCTGCTG TTCGCCGAGA CCGGCACCCT CGGGGTCCGC
CGCGCCACCG TGGATCGCAC GGTCCTGCCA CGGCACTTCG AGACAGTCCA CGTCGACGGC
GTCCCGGTCA GCGTGAAGCA CGGCCCGTAC GGCGCCAAAC CCGAGCACGA CGACCTCGTC
GCCGCCGCCG GCCGGCTCGG GCTCCCGCTG CGTGCCGTCG CCGAACGGGC GATGCGTCTT
TCCTCAGGGA GCACCCCATG A
 
Protein sequence
MICWINPFTG LAGDMLLAAL LDAGAPLEQV RTAVAATGLT GWELTAERVS DHGLTGTRVR 
VRVTDHAAER RAAELIALAS AATPPPVAAR AVAALRAIAE VEARIHGADP AAVHLHELGG
HDTVVDIVGV AAAMHALGVD DVVCAPLPLG TGRVRSAHGL IPAPAPATLA LLAGAVVVGT
DLPGETVTPT GAALLRALNA RFDPVPAMTV RATGYGFGTR RLPDRPNVVA VTFGERQRGG
GGGDGETVTV LETNLDDVTG EVLGHVIARS LEAGALDAWA TPAVMKKGRP GHVLHLLVEQ
QDCDALQELL FAETGTLGVR RATVDRTVLP RHFETVHVDG VPVSVKHGPY GAKPEHDDLV
AAAGRLGLPL RAVAERAMRL SSGSTP