| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4912 |
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| Symbol | |
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| ID | 8336266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5601485 |
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| End bp | 5603128 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958011 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115613 |
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| Protein GI | 256394049 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.365133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGAA ACAACCGCCG AACACACCTG CGCCGCATAT GGCGGGCGAC CGTGGCCGCC
GCCGTGTCGC TGGTCGCCGC ACCCCTGCTC GCCCTCGGCG CGGCGCAGCC CGCCCACGCG
CTGAACAACC AACTCGCGCT GACCCCGCAG ATGGGGTTCA ACGACTGGAA CGCCTACGGC
TGCAACGTGT CGGAGTCGTT AATCAAGTCC ACGGCGCTGG CTATGCACAA CGACGGTATG
CAGGCCGCCG GGTACCAGTA CGTCAACATC GACGACTGCT GGCTCACCCA CAACCGCGAC
TCCTCCGGGC AGCTGGTGCC CGACCCGGCG AAGTTCCCCG ACGGGATCTC CGGCACCGCC
GCCTACGTCC ACTCCCTCGG TCTGAAGCTG GGCATCTACG AGGACGCCGG CACCATGACG
TGCGCCGGCT ATCCCGGCAG CCTGGGCCAT GAGCAGACCG ACGCAAACTC CTTCGCCGCC
TGGGGCGTGG ACTACCTCAA GTACGACAAC TGCTACGCCG ACGGGGTCCA TCAATCCGGC
GACGGCGGAC CCAGCGCGCA GAGCCGCTAC ACCACGATGC GCGACGCACT GGCCAAAACC
GGCCGCCCGA TCCTGTTCAG CCTGTGCAGC TGGGGTCTGG ACAGCGTGTG GAACTGGGGC
TCCGGCGTCG GCAACAGCTG GCGCACCACC GGGGACATCA ACGCCAGCTT CGGCAGCATG
CTCTCGATCT TCCACAGCAA CGTGGGCCTG GCCTCCCACG CCGGTCCCGG CGCCTGGAAC
GACCCGGACA TGCTGGAGGT CGGCAACGGC ATGTCGGCCA CCGAGGACCG TAGCGAGTTC
AGCCTGTGGG CCGAGATGGC CGCCCCGCTG ATCTCCGGGA CCAACCTGGC CAACGCCAGT
TCCACGACCC TGGCCACCCT CACCAACTCC CGGGTGATCG CGGTCGACCA GGACTCCCTG
GGCAAGCAGG GCACCGAAGT GTCCTCCTCC GGCGGTCTGG ACGTACTGGC CAAGCCGCTG
GCCAACGGCG ACGTCTCGGT CGCGCTGTTC AATGAGAACA GCGGCACCGC CACCATCAAC
ACCACCGTCG CCGCCATCGG CAAAACCGGC GCGAGCGGCT ACACGCTGAC CGATCTGTGG
AGCGGCGCGA CGTCGACGAC CACAGGCGCG ATCAGCGCCT CGGTCCCCGG CCACGGCACG
GTCATGTTCC GCGTCGCCGG CGGCACCAGC GGCGGCGGTG GCGGCTCGAG CCCCGGCGAG
GTGCACGCCG TCGGCGCCGG CAAGTGCCTG GACGTCCCGA ACAGTTCGAC CACCGGCGGC
ACGCAGCTGG ACATCAACGC CTGCTCCGGC GCCGCGAACC AGACCTTCAC CCACAACGGC
TCGAACCAGC TGACGGTCTA CTCCGGCGGC ACCCAGATGT GCCTGGACGC CAACAACAAG
GGAACCACCA ACGGCACCAA GGTGATCATC TGGTCCTGCA ACGGCCAGCC GAACCAACAG
TGGCTCGTCA ACAGCAATGG CACCATCACC GGCGCCCAGT CCGGCCTGTG CATGGACGTC
ACCGGCGCCG CCACCGCCAA CGGGACACCG GTGGAGCTGT GGGCCTGCAA CGGCCAGTCC
AACCAGCAGT GGACGCTCAG CTGA
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| Protein sequence | MDRNNRRTHL RRIWRATVAA AVSLVAAPLL ALGAAQPAHA LNNQLALTPQ MGFNDWNAYG
CNVSESLIKS TALAMHNDGM QAAGYQYVNI DDCWLTHNRD SSGQLVPDPA KFPDGISGTA
AYVHSLGLKL GIYEDAGTMT CAGYPGSLGH EQTDANSFAA WGVDYLKYDN CYADGVHQSG
DGGPSAQSRY TTMRDALAKT GRPILFSLCS WGLDSVWNWG SGVGNSWRTT GDINASFGSM
LSIFHSNVGL ASHAGPGAWN DPDMLEVGNG MSATEDRSEF SLWAEMAAPL ISGTNLANAS
STTLATLTNS RVIAVDQDSL GKQGTEVSSS GGLDVLAKPL ANGDVSVALF NENSGTATIN
TTVAAIGKTG ASGYTLTDLW SGATSTTTGA ISASVPGHGT VMFRVAGGTS GGGGGSSPGE
VHAVGAGKCL DVPNSSTTGG TQLDINACSG AANQTFTHNG SNQLTVYSGG TQMCLDANNK
GTTNGTKVII WSCNGQPNQQ WLVNSNGTIT GAQSGLCMDV TGAATANGTP VELWACNGQS
NQQWTLS
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