| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4905 |
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| Symbol | |
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| ID | 8336259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5589627 |
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| End bp | 5591012 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958004 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115606 |
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| Protein GI | 256394042 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.151016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAC GCAGAGCCGT TTTCGGACCA GTGGCGCTCA TGGCGCTGCT GGTCGCCTTA
GTGAGTGCAC TGACGGTATA CGGAGGACTC GGTGCCGCCT CGGCGTCGCC GGGCGCCGCC
CCCGCCGCGG CCTCCAGCGG TTGCGGCAAG GCTCCGGTGC TGGCCAGTGG TTCGCACACG
ATTCAAAGCA GCGGTCAGAA CCGCAGCTAC ATCCTGCGGC TGCCGGCGAA CTACGACAGC
AGTCATCCCT ACCGGCTGGT CTTCGGTTTC CACTGGGTGG GCGGTACCGA CAACGACGTC
GACTCCGGGG GAACCGACGG ATACAACTGG TCCTACTACG GGCTGCGGAA GCTGGCCGAT
GCGGACGGGA ACGGCACGAT CTTCGTCGCC CCGCAGGGCA TCAACAACGG CTGGGCCAAC
TCCGGCGGCC AGGACGTCAC GTTCGTCGAC GACATGCTCA GCCAGTTCGA ATCAGGACTG
TGTCTGGACA CCAGTCAGGT CTTCTCCTCC GGCTTCAGCT ACGGCGGGTC CATGACCTAC
GCCCTGGCCT GCGCGCGGCC GGCGGTCTTC CGCGCGGTCG CGGTCTACTC CGGAGCGAAC
CTGAGCGGAT GCGCCGGCGG CACCCAGCCG GTGGCATATA TAGGTCTGCA CGGCATCCGG
GACAACACCC TGCCGATCGC CAACGGCCGG GCACTGCGTG ACACCTTCGT CCGCAACAAC
AAGTGCACGC CGCAGAACCC GCCCGAACCG GCCTACGGCA GCCTGACGCA CATCGTCACC
GCCTACTCCG GCTGCCTGCC CGGGTATCCG GTGGTCTGGG CCGCCTTCGA CGGCGCCGGC
CACGACCCCG GACCCATCGA CGGCAGCACC GGCGACGGCT GGCACACCTG GACGTCCGGC
GTCGTCTGGA ACTTCTTCAC CCAGTTCCAG AACGGCCAGC CGCCGAGCAG CACGCCGTCG
ACACCGCCCT CGACCACGCC GCCCGGCAAC GGTCAGGGAG CGCTGCACGC GATCGGCGCG
GGCAAGTGCC TCGACGATCC GAACTCGGCC ACCACCACCG GGACCCAGCT GCAGATCCAT
GACTGCACCG GGCAGGCGAA CCAGGCCTGG ACGCACACGT CCTCCGGGCA GCTGAGCGTC
ACGGTGGGCG GCAGCACGCT GTGCCTGGAC GCCAACGGCA AGGGCACGAC CAACGGCACC
AAGGCGATCC TGTGGTCCTG CAACGGCCAG AGCAACCAGC AGTGGACGCT CAACTCCAAC
GGCACCGTCA CCGGAGCACA GTCAGGGCTC TGCCTGGACG TCACCGGCGC CTCGAGCGCC
AACGGCGCCC TGGTCGAGCT GTGGACGTGC AACGGCGGCA GCAACCAGCA GTGGGCACTG
AGCTGA
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| Protein sequence | MQKRRAVFGP VALMALLVAL VSALTVYGGL GAASASPGAA PAAASSGCGK APVLASGSHT
IQSSGQNRSY ILRLPANYDS SHPYRLVFGF HWVGGTDNDV DSGGTDGYNW SYYGLRKLAD
ADGNGTIFVA PQGINNGWAN SGGQDVTFVD DMLSQFESGL CLDTSQVFSS GFSYGGSMTY
ALACARPAVF RAVAVYSGAN LSGCAGGTQP VAYIGLHGIR DNTLPIANGR ALRDTFVRNN
KCTPQNPPEP AYGSLTHIVT AYSGCLPGYP VVWAAFDGAG HDPGPIDGST GDGWHTWTSG
VVWNFFTQFQ NGQPPSSTPS TPPSTTPPGN GQGALHAIGA GKCLDDPNSA TTTGTQLQIH
DCTGQANQAW THTSSGQLSV TVGGSTLCLD ANGKGTTNGT KAILWSCNGQ SNQQWTLNSN
GTVTGAQSGL CLDVTGASSA NGALVELWTC NGGSNQQWAL S
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