Gene Caci_4896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4896 
Symbol 
ID8336250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5578790 
End bp5579560 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content76% 
IMG OID644957995 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003115597 
Protein GI256394033 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CCGGCGGCAG GACCGCCGCC GACCGGCTCC TGGCCGTGCT GGCCGCGTTC 
GACCACGCGC ATCCGGCGCT GACGCTCACC GACGTCAGCC GCCGGGCCGG GCTCACGCTG
CCCACCGCGC ACCGCCTGGT CGGCATGCTC GCGGCCTGGG GCGCGCTCGA GCGCGACGAG
TCCGGGGCGT ACCGCATCGG GCTGCGGCTG CTGGAGCTCG CCGCGCTCGC CCCGCGCGGC
CTGGTGCTGC GCGAGGCCGC GATGCCGTTC CTGGAGGACC TGTTCGAGGC CACCCACGAG
AACGTCCAGC TCGCGGTGCG GGACAACGCG GAGGTCGTCT ACGTGGAGCG CCTCGCCGGA
CGCTCGGCGG TCGGCGTGCG GACGCAGGTC GGCGCCCGCT GGCCGCTGCA CGCCACCGGT
GTCGGCCTGG TGCTGCTCGC GCACAGCCCG GCCGGCTTCC AGGACGGATA CCTGGCCGGA
CCGCTCGAAT CCTTCACCGC GCACACCGTC ACCGAGCCGC GGCGCCTGCG CCGGATGCTC
GCCGAGGTGC GGCACTCCGG CTGCGCGGTC AGCGAGCGGC AGATCACCGA CGACGCGCTG
TCGGTGGCCG CGCCTATACG CGGCCCGCAC GGCGACGTCG TCGCGTCCGT CTCCGTGGTC
GTCCACGCCG AAGGCGCGCG CCCGAACGCG CTGATCCCGG CCGTGCGCGT CGCCGGCGCG
GGCATCTCCC GCGCCCTGGG CTGGCAGCCG CCGATCGGGG CTTCCGCCTG A
 
Protein sequence
MSEPGGRTAA DRLLAVLAAF DHAHPALTLT DVSRRAGLTL PTAHRLVGML AAWGALERDE 
SGAYRIGLRL LELAALAPRG LVLREAAMPF LEDLFEATHE NVQLAVRDNA EVVYVERLAG
RSAVGVRTQV GARWPLHATG VGLVLLAHSP AGFQDGYLAG PLESFTAHTV TEPRRLRRML
AEVRHSGCAV SERQITDDAL SVAAPIRGPH GDVVASVSVV VHAEGARPNA LIPAVRVAGA
GISRALGWQP PIGASA