Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4896 |
Symbol | |
ID | 8336250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5578790 |
End bp | 5579560 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644957995 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003115597 |
Protein GI | 256394033 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC CCGGCGGCAG GACCGCCGCC GACCGGCTCC TGGCCGTGCT GGCCGCGTTC GACCACGCGC ATCCGGCGCT GACGCTCACC GACGTCAGCC GCCGGGCCGG GCTCACGCTG CCCACCGCGC ACCGCCTGGT CGGCATGCTC GCGGCCTGGG GCGCGCTCGA GCGCGACGAG TCCGGGGCGT ACCGCATCGG GCTGCGGCTG CTGGAGCTCG CCGCGCTCGC CCCGCGCGGC CTGGTGCTGC GCGAGGCCGC GATGCCGTTC CTGGAGGACC TGTTCGAGGC CACCCACGAG AACGTCCAGC TCGCGGTGCG GGACAACGCG GAGGTCGTCT ACGTGGAGCG CCTCGCCGGA CGCTCGGCGG TCGGCGTGCG GACGCAGGTC GGCGCCCGCT GGCCGCTGCA CGCCACCGGT GTCGGCCTGG TGCTGCTCGC GCACAGCCCG GCCGGCTTCC AGGACGGATA CCTGGCCGGA CCGCTCGAAT CCTTCACCGC GCACACCGTC ACCGAGCCGC GGCGCCTGCG CCGGATGCTC GCCGAGGTGC GGCACTCCGG CTGCGCGGTC AGCGAGCGGC AGATCACCGA CGACGCGCTG TCGGTGGCCG CGCCTATACG CGGCCCGCAC GGCGACGTCG TCGCGTCCGT CTCCGTGGTC GTCCACGCCG AAGGCGCGCG CCCGAACGCG CTGATCCCGG CCGTGCGCGT CGCCGGCGCG GGCATCTCCC GCGCCCTGGG CTGGCAGCCG CCGATCGGGG CTTCCGCCTG A
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Protein sequence | MSEPGGRTAA DRLLAVLAAF DHAHPALTLT DVSRRAGLTL PTAHRLVGML AAWGALERDE SGAYRIGLRL LELAALAPRG LVLREAAMPF LEDLFEATHE NVQLAVRDNA EVVYVERLAG RSAVGVRTQV GARWPLHATG VGLVLLAHSP AGFQDGYLAG PLESFTAHTV TEPRRLRRML AEVRHSGCAV SERQITDDAL SVAAPIRGPH GDVVASVSVV VHAEGARPNA LIPAVRVAGA GISRALGWQP PIGASA
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