| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4893 |
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| Symbol | |
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| ID | 8336247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5575068 |
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| End bp | 5576717 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957992 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_003115594 |
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| Protein GI | 256394030 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA CCGCTGACGC CGCGCCGGTC GGACCGCTGG AACGCGGTCT GACCGTCCTG
CGCGCGCTGG CGCTGGCCCG CGGCGACCGA CTGCGCGCCA GCGATCTGGT CCGGGCGACC
GGCCTGGCCC GCTCCCCCGT CGACCGCCTC GCCACGACGC TCGTGCGGCT CGGCTACCTT
CGCGAGCAGG ACGGCCGCGA CTTCGTCCTC ACCCCGAAGG TGCTGGAATT CGGCCTGGCG
TATCTGCGCT CCAGCCGACT GCCTCACCGG CTCGGGTCAC TGGCCGAGGC CCTCGCCGAC
GACCTCGACG AGTCCGTGTC CGTGGCCGTC CCCGACGGCG ACGCGGTGCG GTTCGTCGTG
CAGACGCCGA GGCGGCGCGC GCTGTCCGTC ACCTTCCGCG CCGGGGACGC CCTGCCCGCT
GAACGCTGTG CGCCCGGCGC GTTGTTCGCT GCGGACTGGG ACGAGCAAGG CTTCGAGCGC
TGGCAGGCCC GCATGCTCGC CGATCCTGAC AACACCGCCT TCCCCGCTCT GCCGGCGGCA
CAGATCTCCT CGCGCCCGAC GATGACGGAG TTCCGCCGGC TCGCGGCCGA GGCACGCACG
AACGGCTTCG CCCTGGACGA CCAACTGGTC GAGCCGGGGC TGGTCGCCGT GGCGGTACCG
ATCCGCGACG GATCAGGGCA CGTCGTCGGC GCCCTCAGCG TGGCCAGCCA CACCAGTCGG
CACTCGGCCG CCTCGTTGCG CGAGCGCGCA CTGGAGCCGA TGCTCCGCAC GGCGCGGCGG
ATGACCGAAG CGCTCGCGAC CCACGAGGAC CGGCCGGCCG TCCACCGTCC TTCGCGCGAC
GATTCGCTGG ATCCCAAAGG AGAACTGGGC CCGGAGTACC TGCAATCGCT CGCTCGCGGT
CTGAGCGTGC TGGCCGCGCT GAGCGTCCCG GGCGGTATGA CGCTGACCGA GGTCGCCGAA
GCCACGGCAC TGCCCCGCGC CACAGCCCGG CGCTCGCTGC TGACCCTGGA AAGCCTTGGC
TACGTCGCTA CGGACAGCCG CCGCTTCCTC CCGCTCCCCC GCGTGCTGGA GCTCGGCTAT
CCCACCGTCT CAGCCCGCTC GCTGGCCGAC GTGGCGCAGC CGCACCTCGT CGATCTGGTC
CACCGCGTGC ACGAGTCGAC CTCCGTCGCC GTCCTGGACG GTCACGACAT CCGCTACATC
GCCCGGGTCG CCGCAAGCCG CATCATGTAC GTCGACATCA CCGTCGGGAC CCGCTTCCCC
GCGCACGCCA CGTCGATGGG CCGGGTCCTG GTGGCGGGCC TCGCCCCCGG ACCGCGCTCG
GCATGGCTGG ACGCAGCCGA CCTCGCGCCG TTGACCGCGC ACACCGTCAC CGCTCCCGAC
CGTCTCAAAG CCCTGCTGAA GCAGACAACA CGCGACGGCT TCGCCCTCGT CGACCAGGAA
CTGGAGGAGG GGGTACGCTC CCTGGCCGTG CCGCTGTGCG GTTCGGACGG ACGGGTCGTC
GCCGCCGTGA ACGTGTCACT GCACGCCGGG CGGGCATCGC TGCAGGATGT TCCCGGGCTC
TTGCTGCCCG CCCTGCGGGA GACCGCCAGG CGGATCACCG AGGACATCGC GCTGGTCTTC
GCCCTGCAGC CGATCCCCTC ACAGGTCTAG
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| Protein sequence | MPQTADAAPV GPLERGLTVL RALALARGDR LRASDLVRAT GLARSPVDRL ATTLVRLGYL
REQDGRDFVL TPKVLEFGLA YLRSSRLPHR LGSLAEALAD DLDESVSVAV PDGDAVRFVV
QTPRRRALSV TFRAGDALPA ERCAPGALFA ADWDEQGFER WQARMLADPD NTAFPALPAA
QISSRPTMTE FRRLAAEART NGFALDDQLV EPGLVAVAVP IRDGSGHVVG ALSVASHTSR
HSAASLRERA LEPMLRTARR MTEALATHED RPAVHRPSRD DSLDPKGELG PEYLQSLARG
LSVLAALSVP GGMTLTEVAE ATALPRATAR RSLLTLESLG YVATDSRRFL PLPRVLELGY
PTVSARSLAD VAQPHLVDLV HRVHESTSVA VLDGHDIRYI ARVAASRIMY VDITVGTRFP
AHATSMGRVL VAGLAPGPRS AWLDAADLAP LTAHTVTAPD RLKALLKQTT RDGFALVDQE
LEEGVRSLAV PLCGSDGRVV AAVNVSLHAG RASLQDVPGL LLPALRETAR RITEDIALVF
ALQPIPSQV
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