| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4888 |
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| Symbol | |
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| ID | 8336242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5570573 |
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| End bp | 5572279 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957987 |
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| Product | fumarate lyase |
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| Protein accession | YP_003115589 |
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| Protein GI | 256394025 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.888807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTTCCG CTGACGTCGG CCTGCTCGCA CCGGTCTGGG CCGGCACAAC GGTCGAAGAA
GCCACCGGCG ACCCCGCCTT CCTGCAAGCA ATGCTCGACG CCGAAGCCGC TCTGACCCGC
GCCCAGGCAG CACTCGGCCA GGCACCCGAC GCGGCCGCGG CCGCCATCAC CGCGGCGGCG
CGCGCCGAGA ACTTCGACCT CCGCGACATC GCACTACGAG CGCGCACCGG CGGCAACCCG
GTCATCCCGC TGGCCGCCGA TCTGACAGCC GCCGTCCCCG CCGCCGCTGC CCCGTTCGTC
CACCACGGCG CGACCAGCCA GGACATCCTC GACACGGCGA TGATGCTGAT CGCCGCACGC
GCCATCGCGA CGGTGCAGGA CGACCTCCGC CGCACCGCGG ACACCTTGGC AACCCTGGCC
GCCGCACACC AGAACACACC GATGCCCGGC CGCACACTCA CCCAGCACGC AGTCCCGACC
ACATTCGGCC TCAAAGCCGC CGGCTGGCGA ACCCTCATCC TGGACAGCAT GGACCGCCTG
GCCACCCTGC ACCTGCCGGC CCAACTCGGC GGCGCGGCCG GAACGCTCGC GGCGTTCGAG
GTGCGGGCTG ATGCGATCGA CCATCCCGAA GACTTTTCGC GACGCTCGCC CCTTCCAGGG
TCCGGGTCGA CGCCGCCAGG CACCACGATC GCCCATCCCG AAGACTCTCC GGGAGCCTTG
CCGCTTTCCG CGTCCCAGCT GACGCCGTCG CAAAGCAGCG TGATCGCTCA GCCCGAGGAT
TTACCGGGAG CCTCGCCGCT TCCGATGTCC GCGCCGACGC CGCCGCCAGG TAGCGCGATC
GACTATCCCG AGAACTCTCC GGGACGCTCG CGGCTTTCCA TGTCCCAGCT GACGCCGTCG
CCGGGCAGCA CGATCGATCA TCCCGAGGAT TCACCGCGAC GTTCGCCGAC GCCGGGCAGC
GCGATCGATC TTCCCGGAGC GTTCGCCCGG GAGCTTGGGC TGGCCGTGCC GGAGCTGCCC
TGGCATGTGC TGCGGACTCC CGTTGCTGAC CTCGGCGGTG CTCTGGCCTT CGCCGTCGGC
GCTATGGCGA AGGTCGCTGC TGATGTGCTG GTGTTGTCGC GGACTGAGGT CGGTGAGGTT
GCCGAGGGGG CTGCGGGTGG TTCCTCGGCC ATGCCGCACA AGGCGAATCC GGTGCGCGCG
ACGCTGATTG CCGCTGCTGC TCGCCAAGCG CCGGCGTTGG CTGCGGTGCT GTTCGGTGCG
CTTGTTGCTG AGGACGAGCG GCCGGCTGGA GCCTGGCACG CCGAGTGGCA GCCGCTGCGG
GAACTTCTGC GGCTTGCCGG TGGCGCTGCG GAGGCCGCTG CTGGACTCGT CGCCGGTTTG
CGCGTCCTCC CCGACCGGAT GCTCGACAAC CTGCATCGCA CTCGGGGGCT GGTCGTCAGC
GAGCGGCTGG CCGCCGAGGT GAGCGGGGTC CTCGGCCGGG GTCCGGCCAA GCAGCTGCTC
GCCGATGCCG CGGATCGGGT CGGCAGCCTT GGCACGAGCC TGGAGGACGT TCTGGCGGAT
GCCCCGGAAC TCAAAGGCCT GATCAGCCGG GACCGACTGC GGAGGCTCAC CGATCCCGCC
GACTACCTCG GCGCGGCCGA GGCGCTCGTG GACCGGGCCC TGCGTCGCAT GCCGCCGCCG
ACGCCGCCAC GAAAGAACTG CCCATGA
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| Protein sequence | MTSADVGLLA PVWAGTTVEE ATGDPAFLQA MLDAEAALTR AQAALGQAPD AAAAAITAAA
RAENFDLRDI ALRARTGGNP VIPLAADLTA AVPAAAAPFV HHGATSQDIL DTAMMLIAAR
AIATVQDDLR RTADTLATLA AAHQNTPMPG RTLTQHAVPT TFGLKAAGWR TLILDSMDRL
ATLHLPAQLG GAAGTLAAFE VRADAIDHPE DFSRRSPLPG SGSTPPGTTI AHPEDSPGAL
PLSASQLTPS QSSVIAQPED LPGASPLPMS APTPPPGSAI DYPENSPGRS RLSMSQLTPS
PGSTIDHPED SPRRSPTPGS AIDLPGAFAR ELGLAVPELP WHVLRTPVAD LGGALAFAVG
AMAKVAADVL VLSRTEVGEV AEGAAGGSSA MPHKANPVRA TLIAAAARQA PALAAVLFGA
LVAEDERPAG AWHAEWQPLR ELLRLAGGAA EAAAGLVAGL RVLPDRMLDN LHRTRGLVVS
ERLAAEVSGV LGRGPAKQLL ADAADRVGSL GTSLEDVLAD APELKGLISR DRLRRLTDPA
DYLGAAEALV DRALRRMPPP TPPRKNCP
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