| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4883 |
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| Symbol | |
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| ID | 8336237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5561031 |
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| End bp | 5564669 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957982 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003115584 |
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| Protein GI | 256394020 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0885799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGA TCGGTTCATC GCGACGAGTG CTCACGCTGG GCGCCGTCGC CGCGTTGGCG
GCGTCTGTCA TGGCCGCGAC ACCCGCACCC CCTGCGGCGG GTGCCGCGGG CAGCGGCGGG
TCGACACCGA TCTACTTGCA AACCCGCTAC TCGTTCGCCG AGCGCGCCGC CGACCTCGTC
TCGCGGATGA CGCTGCCGGA GAAGGTGGCA CAGCTGCACA CCAACAGCGC GCCGGCGATT
CCGCGCCTGG GCGTGCAGTC GTATACCTAC TGGAGTGAAG GCCAGCACGG CATCAACCTG
CTGGGTGCGG ACTCGAACAA CGGCGGTGCG GCCGGCGGAC CGCACGCCAC CAGCTTCCCG
ACCAATCTGT CCTCGACGAT GTCCTGGGAT CCGGCCCTGG TCTACCAGGA GACGACGGCC
ATCTCCGACG AGGTCCGCGG AGAACTGGAC AAGTCCTTGT GGGGCGTCGC CCAGAACAAC
ATCGGCCCGT CTGCGGACGA CTACGGCTCC CTGACCTACT GGGCGCCAAC CGTCAACATG
GACCGCGACC CGCGCTGGGG GCGCACCGAC GAAGCCTTCG GAGAGGACCC CTACCTGGTG
GGGAAGATGG CCGGCGCGTT CGTCGCCGGC TACCAGGGTG AGACGATCGA CGGCACGCCG
ACCAGCCCGT ATCTGAAGGT CGCGGCGACG GCCAAGCACT TCGCGCTCAA CAACAACGAG
AACGACCGGC ACGCCGACTC CGCCGACGCC AGCGAGTCCG ACATCCGCGA CTACTACACC
GCGCAGTTCC GCAGCCTGGT GGAGGACTCG CACGTAGCGG GCCTGATGAC GTCGTACAAC
GCCATCAACG GAACCCCGTC GCCGGCCGAC ACCTACACCA CCGACGCGCT GGCGCAGCGC
ACCTGGGGCT TCGACGGCTA CATCACCTCG GACTGCGGCG CGGTCGGCGA CGTCACCGCC
TCCTCCAGCC ACGACTGGGC ACCGCCGGGA TGGACTGTCT CGGTCGTCAA CGGCACCAGT
ACGTGGACGA ACACCGCGAC CGGCGTCCAG GTGCCGGCCG ACGCGGGCGG CCAGGCCTAC
GCGCTGCGCG CCGGAACCGA TGCCAACTGC ACCGGCGGCG ACGCCACACT CGGCAACATC
GAGGCCGCGA TCAAGGCGGA GATCCTCAGC GAGGGCGTGA TCGACCATGC CCTCGTCCAG
CTGTTCACCG TGCGCATGCA GACCGGCGAG TTCGACCCGG CGAACAAGGT CGCCTACACC
CGCATCACCA AGGCGCAGAT CCAAAGCCCT GAGCACCAGG CTCTAGCTGA GAAGGTGGCG
GCCAACTCCC TGGTGCTGCT CAAGAACGAC CCGATGCCGG GCTCCGCAGC CAAGGTGCTG
CCGGCGAACC CCGCGAGCCT GAACAACGTC GTGGTCGTCG GCGACCTGGC GAACACGGTC
ACCCTCGGCG GGTACTCCGG TGACCCGACG CTCCAGGTGA ACGCCGTGCA GGGCATCACT
TCCGCGGTCA AGGCGGCCAA CCCGAACGCC ACCGTCACCT TCGATGCCTG CGGCACCTCC
ACGACCGCCA CCGCAGCGGC GTCCTGCTCC GCGGCGACCC AGGCCGCGAT CAAGACCGCG
GACCTGGTCG TGGTGTTCGT CGGTACCGAC GGGAGCACCG CGGGGGAGAG CAACGACCGC
GCGAGCCTGG CCATGCCCGG CAACTACGAC TCGCTGATCA GCCAGGTCGC CGCGCTCGGC
AACCCCCGCA CCGTGCTGTC GATGCAGACC GACGGCCCGG TCGACATCGA GAACGTCAAG
GGCGACTTCC CCGCCATCGT CTACAGCGCC TACAACGGCG AGAGCCAGGG CACCGCGCTG
GCCGACGTCC TGTTCGGCAA GCAGAACCCG AGCGGGCACC TGGACTTCAC CTGGTACAAG
GACGACTCGC AGCTGCCGTC GATCAAGAAC TACGGTCTGA ACCCGGCGGA CACCGGTGGC
CTGGGCCGCA CCTACCAGTA CTTCACCGGC ACGCCGACCT ATCCCTTCGG CTACGGCCTG
AGCTACACCG ACTTCGCCTA CTCCAAGGTC CAGGCGACCG ACCACGCCGA CGCTCAGGGC
AAGGCCACCG TCCGGTTCGA CGTCACCAAC ACCGGCAAGA CGCCGGGAGC CACAGTCGCA
CAGCTCTACA TCACCCCGCC CAGCGTGCCC GGAACGCAGC AGCCCGCTGA GCAGCTCGAA
GGCTTTGCGA AGACGGCCGT CCTCAAGCCC GGCCAGACCC AGCACCTGTC CGTCTCCGTC
AACATCGCCG ATCTGGCGAC CTGGGACGCG CAGAACGCGA AGAACGCCGT CACCGACGGC
ACGTACACGC TGCGGCTCGC CACCGACGCC GCCGACACCG TCGCCTCCCG CCCGCTGCGG
GTCACCGGGG CGATCAAGCC GCGGATCCAG TACGTGACGG TGCAACCCGA CCAGGTGGTC
TTCACCCCCG GGAACACGCT CGACCTGACC GGGAAGAACC CGTGGATCGC GGACGACACC
GCGCAGGCCG CGCAGCATCC GAGCGCGGAC AGCGTCGTCG AGGCGGTGAA CAACGACGAG
TCCTTCGCCG ACCTGAGCAG CGAGCACGTC AAGTACAGCA GCAGCGATCC GGCGGTCGCC
TCGGTCAGCC GCACCGGCGT CGTCACCACG CACGCCGTCG GCACCGCGAC GATCCGCGTG
AGCGTCGACG GCGTCACCGG CTCGACGCCG ATCGCCGTGC ACGAGCCGTT CGCGATGAGC
GCGCCGGCCG TCGCCGTGCC CGGCGGCAGC TTCACCGTCA CCACCACCTC GGCGAACCCG
AGCGGCGGGG AGAAGCTGCG CAACGCCGCC TTCCACCTCA CCGTGCCCGC GGGCTGGACG
GCCACCGCGA GCACTCCGGC GACGTTCCCC AGCGTGGCGG CCGGCCAGAC CATCACCACC
ACCTGGACGG TCGGCGTCCC CGCGGACGCC AGCCCGACCG CGGACGCGCC GGCGCTGACC
GCGCAGTACA CGTTCACCGA CGGCACCGGC ACCCACAGCG ACACGACCGG AGCCACCGTG
TCGATCCCCT ATTCCTCGAT CGCCGCCGCC TCCACCAACC CCGGCGTCAG CGACGACTCC
GACACCGCCG TCGGCAACCT CGACGGCGGC GGCGCCAGCT ACTCCGCGCA GACCCTCGCC
ACGGCCACCC CGAGCATCAC CCCCGGCGGC ACGTTCACCC ACGACGGTCT GACGTTCACC
TGGCCCGCCC CGGCGCCCGG CACGCCGGAC AACATCGTCG CCACCGGGCA GACCATCCCG
GTCACCGGCA CCGGATCGAC CCTCGGAATC GTCGGCACGG CCGACTACGG AGCCGCCTCC
GGCACCGCCG TGATCACCTA CACCGACGGC ACCACCCAGT CGTTCAGCCT CGCCTACAGC
GACTGGTGGA CCAACGCGGC GGCATCCGGC GGCGACGTCC TGGCCACCTT CCCCTACCTG
AACAACGCCA GCGGAGCGCT CCACAACCAG GTGAGCCTCT ACACCGACAC GGTCCCGCTG
ACCCCGGGCA AGACCATCAA ATATCTGACG CTCCCGAACG TCGGCACGGC CCTGATCAAC
CAGACGGCGA TGCACATCTT CGCGATCGCC GTCGGCTGA
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| Protein sequence | MTLIGSSRRV LTLGAVAALA ASVMAATPAP PAAGAAGSGG STPIYLQTRY SFAERAADLV
SRMTLPEKVA QLHTNSAPAI PRLGVQSYTY WSEGQHGINL LGADSNNGGA AGGPHATSFP
TNLSSTMSWD PALVYQETTA ISDEVRGELD KSLWGVAQNN IGPSADDYGS LTYWAPTVNM
DRDPRWGRTD EAFGEDPYLV GKMAGAFVAG YQGETIDGTP TSPYLKVAAT AKHFALNNNE
NDRHADSADA SESDIRDYYT AQFRSLVEDS HVAGLMTSYN AINGTPSPAD TYTTDALAQR
TWGFDGYITS DCGAVGDVTA SSSHDWAPPG WTVSVVNGTS TWTNTATGVQ VPADAGGQAY
ALRAGTDANC TGGDATLGNI EAAIKAEILS EGVIDHALVQ LFTVRMQTGE FDPANKVAYT
RITKAQIQSP EHQALAEKVA ANSLVLLKND PMPGSAAKVL PANPASLNNV VVVGDLANTV
TLGGYSGDPT LQVNAVQGIT SAVKAANPNA TVTFDACGTS TTATAAASCS AATQAAIKTA
DLVVVFVGTD GSTAGESNDR ASLAMPGNYD SLISQVAALG NPRTVLSMQT DGPVDIENVK
GDFPAIVYSA YNGESQGTAL ADVLFGKQNP SGHLDFTWYK DDSQLPSIKN YGLNPADTGG
LGRTYQYFTG TPTYPFGYGL SYTDFAYSKV QATDHADAQG KATVRFDVTN TGKTPGATVA
QLYITPPSVP GTQQPAEQLE GFAKTAVLKP GQTQHLSVSV NIADLATWDA QNAKNAVTDG
TYTLRLATDA ADTVASRPLR VTGAIKPRIQ YVTVQPDQVV FTPGNTLDLT GKNPWIADDT
AQAAQHPSAD SVVEAVNNDE SFADLSSEHV KYSSSDPAVA SVSRTGVVTT HAVGTATIRV
SVDGVTGSTP IAVHEPFAMS APAVAVPGGS FTVTTTSANP SGGEKLRNAA FHLTVPAGWT
ATASTPATFP SVAAGQTITT TWTVGVPADA SPTADAPALT AQYTFTDGTG THSDTTGATV
SIPYSSIAAA STNPGVSDDS DTAVGNLDGG GASYSAQTLA TATPSITPGG TFTHDGLTFT
WPAPAPGTPD NIVATGQTIP VTGTGSTLGI VGTADYGAAS GTAVITYTDG TTQSFSLAYS
DWWTNAAASG GDVLATFPYL NNASGALHNQ VSLYTDTVPL TPGKTIKYLT LPNVGTALIN
QTAMHIFAIA VG
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