Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4882 |
Symbol | |
ID | 8336236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5559452 |
End bp | 5560954 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644957981 |
Product | Alpha-L-arabinofuranosidase B catalytic |
Protein accession | YP_003115583 |
Protein GI | 256394019 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0472231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGCCA GCTCCAGCGC ACCCCGCCTG CTCAGACTCG GCATCGGACT TCCCCGGCTG GTCGCCGCGC TGATCGTCGT CATCGGCATG ATGATCGGCG CCATGGTCCT GCCCGGACCG GCGCACGCCG CGGTATCCGA ACCCTGCGAT ATCTACGCCG CCGGCGGCAC GCCCTGCGTG GCAGCCCACA GCACGGTTCG GGCGCTCTAC GGCGCGTACA ACGGACCGCT CTATCAAGTC CGGCGCTCCT CCGACAGCAC GACGGCGAAC ATCGGCGTGC TCTCCGCCGG CGGGACCGCG AACGCCGCCG CCCAGGACTC GTTCTGCGCG GGCACCTCCT GTGTGATCAC CGTCGTCTAC GACCAGTCCG GCCACGGCAA CAACGTGGCC TACCAGGGTC CGGGCGGAGC AGGCGGAACG GACACGCCCT CCAACGCGAC CAGCGAGTCG CTGACCGTCG GCGGGTCCAA GGCGTACTCG CTGTACATCA ACCCCGGCAA CAGCTACTGG CACAACGGCT CGGCCACGGG AATGCCCTTG GGCAGCGCGC CCCAAGGCGC CTACATGGTG ACCAGCGGAA CCCACGTCAA CGGCGGGTGC TGCTTCGACT ACGGCAACAG CGAGACCGAC CGGCACGCCG ACGGCGCCGG CGCCATGGAC GCGATCTACT TCGGCACCAG CTGCTGGTTC GGCGGGTGTT CGGGCAGCGG GCCGTGGGTG CAGGCCGACC TCGAATACGG GCTCTACTCC GGGGGCAGCC AGTCCTGGAA CGCCAACCAA CGAGCCTTCA GCAGCCGCTA TGTCACCGCG ATGCTGAAGA ACAACGGGAC TTCGCAGTTC GCGCTCAAGG GCGGGGACGC GCAATCCGGA GGTTTGACGA CATTGTGGAA CGGCGCTCTA CCGCCGGGCT ACAGCCCGAT GCGGCAGCAG GGCGCCATCA TCCTGGGCAG TGGCGGCGAC TGCTGCGCCT CCGGCGGCGG CAACCAGAGC CTCGGGACCT TCTACGAGGG CGCCATCACC GCCGGCTACC CCAGTGACGC CACGGACAAC GCGGTCCAGG CCAACATCGC CGCGGCCGGC TACGGCGGCG GTTCCACCGG CGGCGGCACC GCCGGCGAGG TGCACGCCGT GGGCGCCGGC AAGTGCCTGG ACGTGCCGAA CTCCAGCACC GCGGGCGGCA CCCAGCTGCA GATCAACGCC TGTGCCGGCG GCGCGAACCA GGTCTTCGCG CACACCTCCA GCGGTCAGCT GACGGTCTAC TCCGGCAGCA CCCAGATGTG CCTGGACGCC AACGGGAAGG GCACCACCGC CGGCACGAAG GTGATCATCT GGGCCTGCAA CGGCCAACCC AATCAGCAGT GGAACGTCAC GGCGAACGGC ACGATCACCG GCGCCCAGTC AGGGCTCTGT CTCGACGTCA CCGGCGCCGC CACCGCCAAC GGCTCGCCGG TGGAGCTGTG GACCTGCAAC GGCCAGTCCA ACCAGCAGTG GAGTCTGAGC TGA
|
Protein sequence | MEASSSAPRL LRLGIGLPRL VAALIVVIGM MIGAMVLPGP AHAAVSEPCD IYAAGGTPCV AAHSTVRALY GAYNGPLYQV RRSSDSTTAN IGVLSAGGTA NAAAQDSFCA GTSCVITVVY DQSGHGNNVA YQGPGGAGGT DTPSNATSES LTVGGSKAYS LYINPGNSYW HNGSATGMPL GSAPQGAYMV TSGTHVNGGC CFDYGNSETD RHADGAGAMD AIYFGTSCWF GGCSGSGPWV QADLEYGLYS GGSQSWNANQ RAFSSRYVTA MLKNNGTSQF ALKGGDAQSG GLTTLWNGAL PPGYSPMRQQ GAIILGSGGD CCASGGGNQS LGTFYEGAIT AGYPSDATDN AVQANIAAAG YGGGSTGGGT AGEVHAVGAG KCLDVPNSST AGGTQLQINA CAGGANQVFA HTSSGQLTVY SGSTQMCLDA NGKGTTAGTK VIIWACNGQP NQQWNVTANG TITGAQSGLC LDVTGAATAN GSPVELWTCN GQSNQQWSLS
|
| |