Gene Caci_4879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4879 
Symbol 
ID8336233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5552871 
End bp5553410 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID644957978 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003115580 
Protein GI256394016 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000632237 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGACCT ATGAGGATCT GCCAGCAGAG TTGATGACAG AGCGGCTCCG GTTGCGGCAA 
TGGCACTCGT CGGATGCCGA GGAGTACCGC GGGCTGTGGC TTGAGCGGGA TCCACGTGTA
TTGCGGCGAA TCGACGCGGA AGGGCGCCCG ACAGTCGACG ATCTCCGCGA GGGGATCACT
CGCAATCCGC AGGGAGCGGA GCCCGGGCTG GGTTTGCTGG CGATCGAGCT GCGGGTTTCG
GGGGCGTTCA TCGGATACTG CGGATTGACC GTCAACGGAG CGTCTTTCGA CGAGCCCGAG
ATCGCGTTCG AGGTCGCCCG GAGAGCCCAC GGTCACGGGT ATGCCACAGA GGCTGCGCGT
GCGATCGTCG AAGCCGCGGC CCGGACGGGC CGGCGGCGGC TGTGGGCGAC CGTACGGGAG
TGGAATGCGG CATCGTTCCG GGTGCTCGAG AAGCTTGATT TCCACCGGAG CGGTCGCATC
GATGAGGACG CCGAGCATGG CGATTCGATC TGGATGACAC GCGTACTCGA CCAGGCATAG
 
Protein sequence
METYEDLPAE LMTERLRLRQ WHSSDAEEYR GLWLERDPRV LRRIDAEGRP TVDDLREGIT 
RNPQGAEPGL GLLAIELRVS GAFIGYCGLT VNGASFDEPE IAFEVARRAH GHGYATEAAR
AIVEAAARTG RRRLWATVRE WNAASFRVLE KLDFHRSGRI DEDAEHGDSI WMTRVLDQA