| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4877 |
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| Symbol | |
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| ID | 8336231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5550552 |
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| End bp | 5551592 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957976 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003115578 |
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| Protein GI | 256394014 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00304627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.857214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGATG ATCGGTCGGC GAGGCCTGCG GGCGTCGCGA AGCGTCGGGA CGGGCCTGTC
ACCATCGCCT ACATCGCTGA GAGCGCGGGC GTGTCGGTCC CCACGGTCTC GAAGGTGCTC
AACGGCCGGC CCGGGGTCTC CGACGACACC CGGGCTCGGA TCGAGGACTT GATCATCCAG
CACGGCTATC GCAAGCCTCC GTTCCGGAGC AACACCTTGG AGCTGGTGTT CCGGGAGTTG
GAGAGCTTGT GGGCGGTGGA GATCATCCGG GGTGTCGAGC AGGTGGCCCG TAAGCACCGG
ATCGGGGTGA CGGTCTCGGA GTTCGGTTTG CACGACTCGC TGCCCGAGCC GATGGACGAC
ATGGTGTTCC GCCGTCCCAA GGCCGTCTTG TCCGTGGCGC AGCTGTCGGA CGCCGAGCGG
GAGCAGTTGG CTGCCAACGG GATTCCGTTC GTCGTGTTCG ATCCGATCAG CGAGCTGCCC
GAGGACGTTC CCTTCGTCGG CGCGACCAAC TGGCGGGGCG GGCAGACGGC GACCCGGCAT
CTGATCGGCC TCGGACACCG GCGTATAGCC ATGGTCCGCG GACCCGCGGG ACTGATGTGC
TTCGATGCCC GGACGGCCGC GTACGCCTTC ACGATGGCCG CCGCGGGTCT GCCGGTGGAT
CCGGAACTGA CCGTCGAGGC GGAGCCCAGC AAGGAAGCCG GTTACGCCGC CGCCTGTGGC
CTGTTCGCTC TGGCCGATCG TCCCACCGCG GTGTTCGCGT CCAACGATCT GCAGGCGATC
GGGGTCTACC AGGCCGCGCG GGAAGCCGGT TTGCGCATCC CCGACGATGT GAGCGTGGTC
GGCTTCGACG ACCTGCCGGT GGCGGCCTGG CTGGATCCGC AGCTGACCAC CGTCCACCAG
CCGCTGAGCC AGATGGCGGC AGCGGCCACC GAGCTCGCGC TGGCGCTCGG CCGAGGCGAG
GAAACGCCGC AGCTCGGGGT GGAACTCGCG ACCACCCTCA CGGTGCGCCG GAGTACCGCG
CCGCCCAAGC CGGCGGGGTG A
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| Protein sequence | MTDDRSARPA GVAKRRDGPV TIAYIAESAG VSVPTVSKVL NGRPGVSDDT RARIEDLIIQ
HGYRKPPFRS NTLELVFREL ESLWAVEIIR GVEQVARKHR IGVTVSEFGL HDSLPEPMDD
MVFRRPKAVL SVAQLSDAER EQLAANGIPF VVFDPISELP EDVPFVGATN WRGGQTATRH
LIGLGHRRIA MVRGPAGLMC FDARTAAYAF TMAAAGLPVD PELTVEAEPS KEAGYAAACG
LFALADRPTA VFASNDLQAI GVYQAAREAG LRIPDDVSVV GFDDLPVAAW LDPQLTTVHQ
PLSQMAAAAT ELALALGRGE ETPQLGVELA TTLTVRRSTA PPKPAG
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